Structure-based design of anti-infectives

被引:25
作者
Agarwal, Anil K. [1 ]
Fishwick, Colin W. G. [1 ]
机构
[1] Univ Leeds, Sch Chem, Leeds LS2 9JT, W Yorkshire, England
来源
ANTIMICROBIAL THERAPEUTICS REVIEWS | 2010年 / 1213卷
关键词
structure-based drug design; virtual screening; de novo; antimalarials; antivirals; antibacterials; drugs; STRUCTURE-BASED DISCOVERY; CYSTEINE PROTEASE INHIBITORS; RESEARCH-AND-DEVELOPMENT; TRANSFER-RNA SYNTHETASE; CELL-WALL BIOSYNTHESIS; HIV ENTRY INHIBITORS; ENOYL-ACP REDUCTASE; DE-NOVO DESIGN; PLASMODIUM-FALCIPARUM; DNA GYRASE;
D O I
10.1111/j.1749-6632.2010.05859.x
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Infectious diseases, caused by bacteria, viruses, fungi, protozoa, or parasites are among the leading causes of death worldwide. The efficacy of all current anti-infectives is threatened by the spread of drug resistance factors, with some already made ineffective, and, as a result, there is a pressing need for a new pipeline of robust anti-infective drugs. In silico approaches, such as virtual high throughput screening and de nova structure-based rational drug design, have been established as powerful tools in drug discovery. In this review, we explore the exciting opportunities for antimalarial, antiviral, and antibacterial drug discovery arising from the new paradigm of structure-based drug design.
引用
收藏
页码:20 / 45
页数:26
相关论文
共 129 条
[31]   Identification of novel parasitic cysteine protease inhibitors by use of virtual screening. 2. The available chemical directory [J].
Desai, PV ;
Patny, A ;
Gut, J ;
Rosenthal, PJ ;
Tekwani, B ;
Srivastava, A ;
Avery, M .
JOURNAL OF MEDICINAL CHEMISTRY, 2006, 49 (05) :1576-1584
[32]   Identification of novel parasitic cysteine protease inhibitors using virtual screening. 1. The ChemBridge database [J].
Desai, PV ;
Patny, A ;
Sabnis, Y ;
Tekwani, B ;
Gut, J ;
Rosenthal, P ;
Srivastava, A ;
Avery, M .
JOURNAL OF MEDICINAL CHEMISTRY, 2004, 47 (26) :6609-6615
[33]   Identification of potential glycogen kinase-3 inhibitors by structure based virtual screening [J].
Dessalew, Nigus ;
Bharatam, Prasad V. .
BIOPHYSICAL CHEMISTRY, 2007, 128 (2-3) :165-175
[34]   CCR5 inhibitors in HIV-1 therapy [J].
Dorr, Patrick ;
Perros, Manos .
EXPERT OPINION ON DRUG DISCOVERY, 2008, 3 (11) :1345-1361
[35]   L-735,524 - THE DESIGN OF A POTENT AND ORALLY BIOAVAILABLE HIV PROTEASE INHIBITOR [J].
DORSEY, BD ;
LEVIN, RB ;
MCDANIEL, SL ;
VACCA, JP ;
GUARE, JP ;
DARKE, PL ;
ZUGAY, JA ;
EMINI, EA ;
SCHLEIF, WA ;
QUINTERO, JC ;
LIN, JH ;
CHEN, IW ;
HOLLOWAY, MK ;
FITZGERALD, PMD ;
AXEL, MG ;
OSTOVIC, D ;
ANDERSON, PS ;
HUFF, JR .
JOURNAL OF MEDICINAL CHEMISTRY, 1994, 37 (21) :3443-3451
[36]   DNA gyrase, topoisomerase IV, and the 4-quinolones [J].
Drlica, K ;
Zhao, XL .
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS, 1997, 61 (03) :377-+
[37]   DESIGN, ACTIVITY, AND 2.8 A CRYSTAL-STRUCTURE OF A C2 SYMMETRICAL INHIBITOR COMPLEXED TO HIV-1 PROTEASE [J].
ERICKSON, J ;
NEIDHART, DJ ;
VANDRIE, J ;
KEMPF, DJ ;
WANG, XC ;
NORBECK, DW ;
PLATTNER, JJ ;
RITTENHOUSE, JW ;
TURON, M ;
WIDEBURG, N ;
KOHLBRENNER, WE ;
SIMMER, R ;
HELFRICH, R ;
PAUL, DA ;
KNIGGE, M .
SCIENCE, 1990, 249 (4968) :527-533
[38]   DOCK 4.0: Search strategies for automated molecular docking of flexible molecule databases [J].
Ewing, TJA ;
Makino, S ;
Skillman, AG ;
Kuntz, ID .
JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 2001, 15 (05) :411-428
[39]   Glide: A new approach for rapid, accurate docking and scoring. 1. Method and assessment of docking accuracy [J].
Friesner, RA ;
Banks, JL ;
Murphy, RB ;
Halgren, TA ;
Klicic, JJ ;
Mainz, DT ;
Repasky, MP ;
Knoll, EH ;
Shelley, M ;
Perry, JK ;
Shaw, DE ;
Francis, P ;
Shenkin, PS .
JOURNAL OF MEDICINAL CHEMISTRY, 2004, 47 (07) :1739-1749
[40]   Design of HIV protease inhibitors targeting protein backbone: An effective strategy for combating drug resistance [J].
Ghosh, Arun K. ;
Chapsal, Bruno D. ;
Weber, Irene T. ;
Mitsuya, Hiroaki .
ACCOUNTS OF CHEMICAL RESEARCH, 2008, 41 (01) :78-86