Quantitative comparison of direct phase retrieval algorithms in in-line phase tomography

被引:143
作者
Langer, Max [1 ,2 ,3 ,4 ,5 ]
Cloetens, Peter [5 ]
Guigay, Jean-Pierre [5 ]
Peyrin, Francoise [1 ,2 ,3 ,4 ,5 ]
机构
[1] INSERM, CREATIS LRMN, U630, F-69621 Lyon, France
[2] CNRS 5220, F-38043 Grenoble, France
[3] INSA Lyon, F-38043 Grenoble, France
[4] Univ Lyon, F-38043 Grenoble, France
[5] ESRF, F-38043 Grenoble, France
关键词
phase imaging; tomography; microscopy; simulation;
D O I
10.1118/1.2975224
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
A well-known problem in x-ray microcomputed tomography is low sensitivity. Phase contrast imaging offers an increase of sensitivity of up to a factor of 10(3) in the hard x-ray region, which makes it possible to image soft tissue and small density variations. If a sufficiently coherent x-ray beam, such as that obtained from a third generation synchrotron, is used, phase contrast can be obtained by simply moving the detector downstream of the imaged object. This setup is known as in-line or propagation based phase contrast imaging. A quantitative relationship exists between the phase shift induced by the object and the recorded intensity and inversion of this relationship is called phase retrieval. Since the phase shift is proportional to projections through the three-dimensional refractive index distribution in the object, once the phase is retrieved, the refractive index can be reconstructed by using the phase as input to a tomographic reconstruction algorithm. A comparison between four phase retrieval algorithms is presented. The algorithms are based on the transport of intensity equation (TIE), transport of intensity equation for weak absorption, the contrast transfer function (CTF), and a mixed approach between the CTF and TIE, respectively. The compared methods all rely on linearization of the relationship between phase shift and recorded intensity to yield fast phase retrieval algorithms. The phase retrieval algorithms are compared using both simulated and experimental data, acquired at the European Synchrotron Radiation Facility third generation synchrotron light source. The algorithms are evaluated in terms of two different reconstruction error metrics. While being slightly less computationally effective, the mixed approach shows the best performance in terms of the chosen criteria. (C) 2008 American Association of Physicists in Medicine.
引用
收藏
页码:4556 / 4566
页数:11
相关论文
共 55 条
[21]   A NEW MICROSCOPIC PRINCIPLE [J].
GABOR, D .
NATURE, 1948, 161 (4098) :777-778
[22]  
Goodman J., 2008, INTRO FOURIER OPTICS
[23]   Implementation of a fast method for high resolution phase contrast tomography [J].
Groso, A. ;
Abela, R. ;
Stampanoni, M. .
OPTICS EXPRESS, 2006, 14 (18) :8103-8110
[24]   Mixed transfer function and transport of intensity approach for phase retrieval in the Fresnel region [J].
Guigay, Jean Pierre ;
Langer, Max ;
Boistel, Renaud ;
Cloetens, Peter .
OPTICS LETTERS, 2007, 32 (12) :1617-1619
[25]  
GUIGAY JP, 1977, OPTIK, V49, P121
[26]   Hard x-ray quantitative non-interferometric phase-contrast microscopy [J].
Gureyev, TE ;
Raven, C ;
Snigirev, A ;
Snigireva, I ;
Wilkins, SW .
JOURNAL OF PHYSICS D-APPLIED PHYSICS, 1999, 32 (05) :563-567
[27]   Rapid quantitative phase imaging using the transport of intensity equation [J].
Gureyev, TE ;
Nugent, KA .
OPTICS COMMUNICATIONS, 1997, 133 (1-6) :339-346
[28]   Linear algorithms for phase retrieval in the Fresnel region [J].
Gureyev, TE ;
Pogany, A ;
Paganin, DM ;
Wilkins, SW .
OPTICS COMMUNICATIONS, 2004, 231 (1-6) :53-70
[29]   Phase retrieval with the transport-of-intensity equation .2. Orthogonal series solution for nonuniform illumination [J].
Gureyev, TE ;
Nugent, KA .
JOURNAL OF THE OPTICAL SOCIETY OF AMERICA A-OPTICS IMAGE SCIENCE AND VISION, 1996, 13 (08) :1670-1682
[30]   Imaging cells and tissues with refractive index radiology [J].
Hwu, Y ;
Tsai, WL ;
Chang, HM ;
Yeh, HI ;
Hsu, PC ;
Yang, YC ;
Su, YT ;
Tsai, HL ;
Chow, GM ;
Ho, PC ;
Li, SC ;
Moser, HO ;
Yang, P ;
Seol, SK ;
Kim, CC ;
Je, JH ;
Stefanekova, E ;
Groso, A ;
Margaritondo, G .
BIOPHYSICAL JOURNAL, 2004, 87 (06) :4180-4187