Cytoscape ESP: simple search of complex biological networks

被引：9

作者：

Ashkenazi, Maital ^{[1
]}

Bader, Gary D. ^{[2
]}

Kuchinsky, Allan ^{[3
]}

Moshelion, Menachem ^{[1
]}

States, David J. ^{[4
]}

机构：

[1] Hebrew Univ Jerusalem, Robert H Smith Inst Plant Sci & Genet Agr, IL-76100 Rehovot, Israel

[2] Univ Toronto, Terrence Donnelly Ctr Cellular & Biomol Res, Toronto, ON, Canada

[3] Agilent Technol, Santa Clara, CA USA

[4] Univ Michigan, Ctr Computat Med & Biol, Ann Arbor, MI 48109 USA

来源：

BIOINFORMATICS | 2008年 / 24卷 / 12期

关键词：

D O I：

10.1093/bioinformatics/btn208

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

Cytoscape enhanced search plugin (ESP) enables searching complex biological networks on multiple attribute fields using logical operators and wildcards. Queries use an intuitive syntax and simple search line interface. ESP is implemented as a Cytoscape plugin and complements existing search functions in the Cytoscape network visualization and analysis software, allowing users to easily identify nodes, edges and subgraphs of interest, even for very large networks.

引用

页码：1465 / 1466

页数：2

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