Versatile modes of peptide recognition by the AAA plus adaptor protein SspB

被引:35
作者
Levchenko, I
Grant, RA
Flynn, JM
Sauer, RT
Baker, TA
机构
[1] MIT, Dept Biol, Cambridge, MA 02139 USA
[2] Howard Hughes Med Inst, Cambridge, MA 02139 USA
关键词
D O I
10.1038/nsmb934
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Energy-dependent proteases often rely on adaptor proteins to modulate substrate recognition. The SspB adaptor binds peptide sequences in the stress-response regulator RseA and in ssrA-tagged proteins and delivers these molecules to the AAA+ ClpXP protease for degradation. The structure of SspB bound to an ssrA peptide is known. Here, we report the crystal structure of a complex between SspB and its recognition peptide in RseA. Notably, the RseA sequence is positioned in the peptide-binding groove of SspB in a direction opposite to the ssrA peptide, the two peptides share only one common interaction with the adaptor, and the RseA interaction site is substantially larger than the overlapping ssrA site. This marked diversity in SspB recognition of different target proteins indicates that it is capable of highly flexible and dynamic substrate delivery.
引用
收藏
页码:520 / 525
页数:6
相关论文
共 40 条
[1]   DegS and YaeL participate sequentially in the cleavage of RseA to activate the σE-dependent extracytoplasmic stress response [J].
Alba, BM ;
Leeds, JA ;
Onufryk, C ;
Lu, CZ ;
Gross, CA .
GENES & DEVELOPMENT, 2002, 16 (16) :2156-2168
[2]   degS (hhoB) is an essential Escherichia coli gene whose indispensable function is to provide σE activity [J].
Alba, BM ;
Zhong, HJ ;
Pelayo, JC ;
Gross, CA .
MOLECULAR MICROBIOLOGY, 2001, 40 (06) :1323-1333
[3]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[4]   Nucleotide-dependent substrate handoff from the SspB adaptor to the AAA plus ClpXP protease [J].
Bolon, DN ;
Grant, RA ;
Baker, TA ;
Sauer, RT .
MOLECULAR CELL, 2004, 16 (03) :343-350
[5]   Bivalent tethering of SspB to ClpXP is required for efficient substrate delivery: A protein-design study [J].
Bolon, DN ;
Wah, DA ;
Hersch, GL ;
Baker, TA ;
Sauer, RT .
MOLECULAR CELL, 2004, 13 (03) :443-449
[6]   Crystal structure of Escherichia coli σE with the cytoplasmic domain of its anti-σ RseA [J].
Campbell, EA ;
Tupy, JL ;
Gruber, TM ;
Wang, S ;
Sharp, MM ;
Gross, CA ;
Darst, SA .
MOLECULAR CELL, 2003, 11 (04) :1067-1078
[7]   Characterization of the Escherichia coli σE regulon [J].
Dartigalongue, C ;
Missiakas, D ;
Raina, S .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2001, 276 (24) :20866-20875
[8]   The sigma(E)-mediated response to extracytoplasmic stress in Escherichia coli is transduced by RseA and RseB, two negative regulators of sigma(E) [J].
DeLasPenas, A ;
Connolly, L ;
Gross, CA .
MOLECULAR MICROBIOLOGY, 1997, 24 (02) :373-385
[9]   AAA plus proteins and substrate recognition, it all depends on their partner in crime [J].
Dougan, DA ;
Mogk, A ;
Zeth, K ;
Turgay, K ;
Bukau, B .
FEBS LETTERS, 2002, 529 (01) :6-10
[10]   2 BINDING ORIENTATIONS FOR PEPTIDES TO THE SRC SH3 DOMAIN - DEVELOPMENT OF A GENERAL-MODEL FOR SH3-LIGAND INTERACTIONS [J].
FENG, SB ;
CHEN, JK ;
YU, HT ;
SIMON, JA ;
SCHREIBER, SL .
SCIENCE, 1994, 266 (5188) :1241-1247