Update of ASRP:: The Arabidopsis small RNA project database

被引：56

作者：

Backman, Tyler W. H. ^{[1
,2
]}

Sullivan, Christopher M. ^{[1
,2
]}

Cumbie, Jason S. ^{[3
]}

Miller, Zachary A. ^{[1
,2
]}

Chapman, Elisabeth J. ^{[1
,2
,3
]}

Fahlgren, Noah ^{[1
,2
,3
]}

Givan, Scott A. ^{[1
,2
]}

Carrington, James C. ^{[1
,2
]}

Kasschau, Kristin D. ^{[1
,2
]}

机构：

[1] Oregon State Univ, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA

[2] Oregon State Univ, Dept Bot & Plant Pathol, Corvallis, OR 97331 USA

[3] Oregon State Univ, Mol & Cellular Biol Program, Corvallis, OR 97331 USA

来源：

NUCLEIC ACIDS RESEARCH | 2008年 / 36卷

基金：

美国国家科学基金会;

关键词：

D O I：

10.1093/nar/gkm997

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

Development of the Arabidopsis Small RNA Project (ASRP) Database, which provides information and tools for the analysis of microRNA, endogenous siRNA and other small RNA-related features, has been driven by the introduction of high-throughput sequencing technology. To accommodate the demands of increased data, numerous improvements and updates have been made to ASRP, including new ways to access data, more efficient algorithms for handling data, and increased integration with community-wide resources. New search and visualization tools have also been developed to improve access to small RNA classes and their targets. ASRP is publicly available through a web interface at http://asrp.cgrb.oregonstate.edu/db/.

引用

页码：D982 / D985

页数：4

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