Reference database of Raman spectra of biological molecules

被引:1170
作者
De Gelder, Joke [1 ]
De Gussem, Kris [1 ]
Vandenabeele, Peter [1 ]
Moens, Luc [1 ]
机构
[1] Raman Res Grp, Dept Analyt Chem, B-9000 Ghent, Belgium
关键词
Raman spectroscopy; biology; biomolecules; reference Raman spectra;
D O I
10.1002/jrs.1734
中图分类号
O433 [光谱学];
学科分类号
0703 ; 070302 ;
摘要
Raman spectra of biological materials are very complex, because they consist of signals from all molecules present in cells. In order to obtain chemical information from these spectra, it is necessary to know the Raman patterns of the possible components of a cell. In this paper, we present a collection of Raman spectra of biomolecules that can serve as references for the interpretation of Raman spectra of biological materials. We included the most important components present in a cell: (1) DNA and RNA bases (adenine, cytosine, guanine, thymine and uracil), (2) amino acids (glycine, L-alanine, L-valine, L-serine, L-glutamic acid, L-arginine, L-phenylalanine, L-tyrosine, L-tryptophan, L-histidine, L-proline), (3) fatty acids and fats (lauric acid, myristic acid, palmitic acid, stearic acid, 12-methyltetradecanoic acid, 13-methylmyristic acid, 14-methylpentadecanoic acid, 14-methylhexadecanoic acid, 15-methylpalmitic acid, oleic acid, vaccenic acid, glycerol, triolein, trilinolein, trilinolenin), (4) saccharides (beta-D-glucose, lactose, cellulose, D-(+)-dextrose, D-(+)-trehalose, amylose, amylopectine, D-(+)-mannose, D-(+)-fucose, D-(-)-arabinose, D-(+)-xylose, D-(-)fructose, D-(+)-galactosamine, N-acetyl-D-glucosamine, chitin), (5) primary metabolites (citric acid, succinic acid, fumarate, malic acid, pyruvate, phosphoenolpyruvate, coenzyme A, acetyl coenzyme A, acetoacetate, D-fructose-6-phosphate) and (6) others (beta-carotene, ascorbic acid, riboflavin, glutathione). Examples of Raman spectra of bacteria and fungal spores are shown, together with band assignments to the reference products. Copyright (C) 2007 John Wiley & Sons, Ltd.
引用
收藏
页码:1133 / 1147
页数:15
相关论文
共 25 条
[1]   Raman spectroscopy, the sleeping giant in structural biology, awakes [J].
Carey, PR .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1999, 274 (38) :26625-26628
[2]  
Chumanov G, 2000, PHOTOCHEM PHOTOBIOL, V71, P589, DOI 10.1562/0031-8655(2000)071<0589:RRASER>2.0.CO
[3]  
2
[4]   Raman spectroscopic study of Lactarius spores (Russulales, Fungi) [J].
De Gussem, K ;
Vandenabeele, P ;
Verbeken, A ;
Moens, L .
SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2005, 61 (13-14) :2896-2908
[5]   Probing history with Raman spectroscopy [J].
Edwards, HGM .
ANALYST, 2004, 129 (10) :870-879
[6]   Non-destructive analysis of pigments and other organic compounds in lichens using Fourier-transform Raman spectroscopy: a study of Antarctic epilithic lichens [J].
Edwards, HGM ;
Newton, EM ;
Wynn-Williams, DD ;
Lewis-Smith, RI .
SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2003, 59 (10) :2301-2309
[7]   Evaluation of an accurate calibration and spectral standardization procedure for Raman spectroscopy [J].
Hutsebaut, D ;
Vandenabeele, P ;
Moens, L .
ANALYST, 2005, 130 (08) :1204-1214
[8]   Raman microspectroscopy as an identification tool within the phylogenetically homogeneous 'Bacillus subtilis'-group [J].
Hutsebaut, Didier ;
Vandroemme, Joachim ;
Heyrman, Jeroen ;
Dawyndt, Peter ;
Vandenabeele, Peter ;
Moens, Luc ;
de vos, Paul .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 2006, 29 (08) :650-660
[9]   Rapid identification of Candida spp. in peritonitis patients by Raman spectroscopy [J].
Ibelings, MS ;
Maquelin, K ;
Endtz, HP ;
Bruining, HA ;
Puppels, GJ .
CLINICAL MICROBIOLOGY AND INFECTION, 2005, 11 (05) :353-358
[10]  
Lin-Vien D., 1991, The Handbook of Infrared and Raman Characteristic Frequencies of Organic Molecules