共 126 条
Ribozymes, riboswitches and beyond: regulation of gene expression without proteins
被引:306
作者:

Serganov, Alexander
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机构:
Mem Sloan Kettering Canc Ctr, Struct Biol Program, New York, NY 10021 USA Mem Sloan Kettering Canc Ctr, Struct Biol Program, New York, NY 10021 USA

Patel, Dinshaw J.
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Mem Sloan Kettering Canc Ctr, Struct Biol Program, New York, NY 10021 USA Mem Sloan Kettering Canc Ctr, Struct Biol Program, New York, NY 10021 USA
机构:
[1] Mem Sloan Kettering Canc Ctr, Struct Biol Program, New York, NY 10021 USA
关键词:
D O I:
10.1038/nrg2172
中图分类号:
Q3 [遗传学];
学科分类号:
071007 ;
090102 ;
摘要:
Although various functions of RNA are carried out in conjunction with proteins, some catalytic RNAs, or ribozymes, which contribute to a range of cellular processes, require little or no assistance from proteins. Furthermore, the discovery of metabolite-sensing riboswitches and other types of RNA sensors has revealed RNA-based mechanisms that cells use to regulate gene expression in response to internal and external changes. Structural studies have shown how these RNAs can carry out a range of functions. In addition, the contribution of ribozymes and riboswitches to gene expression is being revealed as far more widespread than was previously appreciated. These findings have implications for understanding how cellular functions might have evolved from RNA-based origins.
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页码:776 / 790
页数:15
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共 126 条
[1]
Crystal structure of a self-splicing group I intron with both exons
[J].
Adams, PL
;
Stahley, MR
;
Kosek, AB
;
Wang, JM
;
Strobel, SA
.
NATURE,
2004, 430 (6995)
:45-50

Adams, PL
论文数: 0 引用数: 0
h-index: 0
机构:
Yale Univ, Dept Mol Biophys & Biochem, New Haven, CT 06520 USA Yale Univ, Dept Mol Biophys & Biochem, New Haven, CT 06520 USA

Stahley, MR
论文数: 0 引用数: 0
h-index: 0
机构:
Yale Univ, Dept Mol Biophys & Biochem, New Haven, CT 06520 USA Yale Univ, Dept Mol Biophys & Biochem, New Haven, CT 06520 USA

Kosek, AB
论文数: 0 引用数: 0
h-index: 0
机构:
Yale Univ, Dept Mol Biophys & Biochem, New Haven, CT 06520 USA Yale Univ, Dept Mol Biophys & Biochem, New Haven, CT 06520 USA

Wang, JM
论文数: 0 引用数: 0
h-index: 0
机构:
Yale Univ, Dept Mol Biophys & Biochem, New Haven, CT 06520 USA Yale Univ, Dept Mol Biophys & Biochem, New Haven, CT 06520 USA

Strobel, SA
论文数: 0 引用数: 0
h-index: 0
机构:
Yale Univ, Dept Mol Biophys & Biochem, New Haven, CT 06520 USA Yale Univ, Dept Mol Biophys & Biochem, New Haven, CT 06520 USA
[2]
Switching on and off with RNA
[J].
Altuvia, S
;
Wagner, EGH
.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,
2000, 97 (18)
:9824-9826

Altuvia, S
论文数: 0 引用数: 0
h-index: 0
机构:
Hebrew Univ Jerusalem, Hadassah Med Sch, Dept Mol Genet & Biotechnol, IL-91120 Jerusalem, Israel Hebrew Univ Jerusalem, Hadassah Med Sch, Dept Mol Genet & Biotechnol, IL-91120 Jerusalem, Israel

Wagner, EGH
论文数: 0 引用数: 0
h-index: 0
机构: Hebrew Univ Jerusalem, Hadassah Med Sch, Dept Mol Genet & Biotechnol, IL-91120 Jerusalem, Israel
[3]
ALTERNATIVE MESSENGER-RNA STRUCTURES OF THE CIII-GENE OF BACTERIOPHAGE-LAMBDA DETERMINE THE RATE OF ITS TRANSLATION INITIATION
[J].
ALTUVIA, S
;
KORNITZER, D
;
TEFF, D
;
OPPENHEIM, AB
.
JOURNAL OF MOLECULAR BIOLOGY,
1989, 210 (02)
:265-280

ALTUVIA, S
论文数: 0 引用数: 0
h-index: 0

KORNITZER, D
论文数: 0 引用数: 0
h-index: 0

TEFF, D
论文数: 0 引用数: 0
h-index: 0

OPPENHEIM, AB
论文数: 0 引用数: 0
h-index: 0
[4]
The Escherichia coli OxyS regulatory RNA represses fhlA translation by blocking ribosome binding
[J].
Altuvia, S
;
Zhang, AX
;
Argaman, L
;
Tiwari, A
;
Storz, G
.
EMBO JOURNAL,
1998, 17 (20)
:6069-6075

Altuvia, S
论文数: 0 引用数: 0
h-index: 0
机构: NICHHD, Cell Biol & Metab Branch, NIH, Bethesda, MD 20892 USA

Zhang, AX
论文数: 0 引用数: 0
h-index: 0
机构: NICHHD, Cell Biol & Metab Branch, NIH, Bethesda, MD 20892 USA

Argaman, L
论文数: 0 引用数: 0
h-index: 0
机构: NICHHD, Cell Biol & Metab Branch, NIH, Bethesda, MD 20892 USA

Tiwari, A
论文数: 0 引用数: 0
h-index: 0
机构: NICHHD, Cell Biol & Metab Branch, NIH, Bethesda, MD 20892 USA

Storz, G
论文数: 0 引用数: 0
h-index: 0
机构:
NICHHD, Cell Biol & Metab Branch, NIH, Bethesda, MD 20892 USA NICHHD, Cell Biol & Metab Branch, NIH, Bethesda, MD 20892 USA
[5]
A small, stable RNA induced by oxidative stress: Role as a pleiotropic regulator and antimutator
[J].
Altuvia, S
;
WeinsteinFischer, D
;
Zhang, AX
;
Postow, L
;
Storz, G
.
CELL,
1997, 90 (01)
:43-53

Altuvia, S
论文数: 0 引用数: 0
h-index: 0
机构:
HEBREW UNIV JERUSALEM,HADASSAH MED SCH,DEPT MOL GENET & BIOTECHNOL,IL-91120 JERUSALEM,ISRAEL HEBREW UNIV JERUSALEM,HADASSAH MED SCH,DEPT MOL GENET & BIOTECHNOL,IL-91120 JERUSALEM,ISRAEL

WeinsteinFischer, D
论文数: 0 引用数: 0
h-index: 0
机构:
HEBREW UNIV JERUSALEM,HADASSAH MED SCH,DEPT MOL GENET & BIOTECHNOL,IL-91120 JERUSALEM,ISRAEL HEBREW UNIV JERUSALEM,HADASSAH MED SCH,DEPT MOL GENET & BIOTECHNOL,IL-91120 JERUSALEM,ISRAEL

Zhang, AX
论文数: 0 引用数: 0
h-index: 0
机构:
HEBREW UNIV JERUSALEM,HADASSAH MED SCH,DEPT MOL GENET & BIOTECHNOL,IL-91120 JERUSALEM,ISRAEL HEBREW UNIV JERUSALEM,HADASSAH MED SCH,DEPT MOL GENET & BIOTECHNOL,IL-91120 JERUSALEM,ISRAEL

Postow, L
论文数: 0 引用数: 0
h-index: 0
机构:
HEBREW UNIV JERUSALEM,HADASSAH MED SCH,DEPT MOL GENET & BIOTECHNOL,IL-91120 JERUSALEM,ISRAEL HEBREW UNIV JERUSALEM,HADASSAH MED SCH,DEPT MOL GENET & BIOTECHNOL,IL-91120 JERUSALEM,ISRAEL

Storz, G
论文数: 0 引用数: 0
h-index: 0
机构:
HEBREW UNIV JERUSALEM,HADASSAH MED SCH,DEPT MOL GENET & BIOTECHNOL,IL-91120 JERUSALEM,ISRAEL HEBREW UNIV JERUSALEM,HADASSAH MED SCH,DEPT MOL GENET & BIOTECHNOL,IL-91120 JERUSALEM,ISRAEL
[6]
New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control
[J].
Barrick, JE
;
Corbino, KA
;
Winkler, WC
;
Nahvi, A
;
Mandal, M
;
Collins, J
;
Lee, M
;
Roth, A
;
Sudarsan, N
;
Jona, I
;
Wickiser, JK
;
Breaker, RR
.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,
2004, 101 (17)
:6421-6426

Barrick, JE
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA

Corbino, KA
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA

Winkler, WC
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA

Nahvi, A
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA

Mandal, M
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA

Collins, J
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA

Lee, M
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA

Roth, A
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA

Sudarsan, N
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA

Jona, I
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA

Wickiser, JK
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA

Breaker, RR
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA
[7]
Structure of a natural guanine-responsive riboswitch complexed with the metabolite hypoxanthine
[J].
Batey, RT
;
Gilbert, SD
;
Montange, RK
.
NATURE,
2004, 432 (7015)
:411-415

Batey, RT
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Colorado, Dept Chem & Biochem, Boulder, CO 80309 USA Univ Colorado, Dept Chem & Biochem, Boulder, CO 80309 USA

Gilbert, SD
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Colorado, Dept Chem & Biochem, Boulder, CO 80309 USA Univ Colorado, Dept Chem & Biochem, Boulder, CO 80309 USA

Montange, RK
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Colorado, Dept Chem & Biochem, Boulder, CO 80309 USA Univ Colorado, Dept Chem & Biochem, Boulder, CO 80309 USA
[8]
A SECONDARY-STRUCTURE MODEL FOR THE SELF-CLEAVING REGION OF NEUROSPORA VS RNA
[J].
BEATTIE, TL
;
OLIVE, JE
;
COLLINS, RA
.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,
1995, 92 (10)
:4686-4690

BEATTIE, TL
论文数: 0 引用数: 0
h-index: 0
机构: Can. Inst. Adv. Res. Prog. Evol. B., Dept. of Molec. and Medical Genetics, University of Toronto, Toronto

OLIVE, JE
论文数: 0 引用数: 0
h-index: 0
机构: Can. Inst. Adv. Res. Prog. Evol. B., Dept. of Molec. and Medical Genetics, University of Toronto, Toronto

COLLINS, RA
论文数: 0 引用数: 0
h-index: 0
机构: Can. Inst. Adv. Res. Prog. Evol. B., Dept. of Molec. and Medical Genetics, University of Toronto, Toronto
[9]
Antibacterial lysine analogs that target lysine riboswitches
[J].
Blount, Kenneth F.
;
Wang, Joy Xin
;
Lim, Jinsoo
;
Sudarsan, Narasimhan
;
Breaker, Ronald R.
.
NATURE CHEMICAL BIOLOGY,
2007, 3 (01)
:44-49

Blount, Kenneth F.
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA

Wang, Joy Xin
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA

Lim, Jinsoo
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA

Sudarsan, Narasimhan
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA

Breaker, Ronald R.
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA
[10]
Riboswitches as antibacterial drug targets
[J].
Blount, Kenneth F.
;
Breaker, Ronald R.
.
NATURE BIOTECHNOLOGY,
2006, 24 (12)
:1558-1564

Blount, Kenneth F.
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA

Breaker, Ronald R.
论文数: 0 引用数: 0
h-index: 0
机构: Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA