Oligogenic heterozygosity in individuals with high-functioning autism spectrum disorders

被引:116
作者
Schaaf, Christian P. [1 ]
Sabo, Aniko [2 ]
Sakai, Yasunari [1 ,5 ]
Crosby, Jacy [6 ]
Muzny, Donna [2 ]
Hawes, Alicia [2 ]
Lewis, Lora [2 ]
Akbar, Humeira [2 ]
Varghese, Robin
Boerwinkle, Eric [6 ]
Gibbs, Richard A. [1 ,2 ]
Zoghbi, Huda Y. [1 ,3 ,4 ,5 ,7 ]
机构
[1] Baylor Coll Med, Dept Mol & Human Genet, Houston, TX 77030 USA
[2] Baylor Coll Med, Human Genome Sequencing Ctr, Houston, TX 77030 USA
[3] Baylor Coll Med, Dept Pediat, Program Dev Biol, Houston, TX 77030 USA
[4] Baylor Coll Med, Dept Neurosci, Program Dev Biol, Houston, TX 77030 USA
[5] Howard Hughes Med Inst, Chevy Chase, MD USA
[6] Univ Texas Hlth Sci Ctr Houston, Ctr Human Genet, Houston, TX 77030 USA
[7] Texas Childrens Hosp, Jan & Dan Duncan Neurol Res Inst, Houston, TX 77030 USA
关键词
COPY NUMBER VARIATION; MENTAL-RETARDATION; ALLELIC VARIANTS; GENE; ASSOCIATION; MUTATIONS; HOXA1; FOXP2; SUSCEPTIBILITY; HOXB1;
D O I
10.1093/hmg/ddr243
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Autism spectrum disorders (ASDs) are a heterogeneous group of neuro-developmental disorders. While significant progress has been made in the identification of genes and copy number variants associated with syndromic autism, little is known to date about the etiology of idiopathic non-syndromic autism. Sanger sequencing of 21 known autism susceptibility genes in 339 individuals with high-functioning, idiopathic ASD revealed de novo mutations in at least one of these genes in 6 of 339 probands (1.8%). Additionally, multiple events of oligogenic heterozygosity were seen, affecting 23 of 339 probands (6.8%). Screening of a control population for novel coding variants in CACNA1C, CDKL5, HOXA1, SHANK3, TSC1, TSC2 and UBE3A by the same sequencing technology revealed that controls were carriers of oligogenic heterozygous events at significantly (P < 0.01) lower rate, suggesting oligogenic heterozygosity as a new potential mechanism in the pathogenesis of ASDs.
引用
收藏
页码:3366 / 3375
页数:10
相关论文
共 44 条
[1]   Subset of individuals with autism spectrum disorders and extreme macrocephaly associated with germline PTEN tumour suppressor gene mutations [J].
Butler, MG ;
Dasouki, MJ ;
Zhou, XP ;
Talebizadeh, Z ;
Brown, M ;
Takahashi, TN ;
Miles, JH ;
Wang, CH ;
Stratton, R ;
Pilarski, R ;
Eng, C .
JOURNAL OF MEDICAL GENETICS, 2005, 42 (04) :318-321
[2]   Prader-Willi syndrome and a deletion/duplication within the 15q11-q13 region [J].
Butler, MG ;
Bittel, D ;
Talebizadeh, Z .
JOURNAL OF MEDICAL GENETICS, 2002, 39 (03) :202-204
[3]   The HOXA1 A218G polymorphism and autism:: Lack of association in white and black patients from the South Carolina Autism Project [J].
Collins, JS ;
Schroer, RJ ;
Bird, J ;
Michaelis, RC .
JOURNAL OF AUTISM AND DEVELOPMENTAL DISORDERS, 2003, 33 (03) :343-348
[4]   Intergenerational transmission of subthreshold autistic traits in the general population [J].
Constantino, JN ;
Todd, RD .
BIOLOGICAL PSYCHIATRY, 2005, 57 (06) :655-660
[5]   No evidence for linkage of liability to autism to HOXA1 in a sample from the CPEA network [J].
Devlin, B ;
Bennett, P ;
Cook, RH ;
Dawson, G ;
Gonen, D ;
Grigorenko, EL ;
McMahon, W ;
Pauls, D ;
Smith, M ;
Spence, MA ;
Schellenberg, GD .
AMERICAN JOURNAL OF MEDICAL GENETICS, 2002, 114 (06) :667-672
[6]   Mutations in the gene encoding the synaptic scaffolding protein SHANK3 are associated with autism spectrum disorders [J].
Durand, Christelle M. ;
Betancur, Catalina ;
Boeckers, Tobias M. ;
Bockmann, Juergen ;
Chaste, Pauline ;
Fauchereau, Fabien ;
Nygren, Gudrun ;
Rastam, Maria ;
Gillberg, I. Carina ;
Anckarsater, Henrik ;
Sponheim, Eili ;
Goubran-Botros, Hany ;
Delorme, Richard ;
Chabane, Nadia ;
Mouren-Simeoni, Marie-Christine ;
de Mas, Philippe ;
Bieth, Eric ;
Roge, Bernadette ;
Heron, Delphine ;
Burglen, Lydie ;
Gillberg, Christopher ;
Leboyer, Marion ;
Bourgeron, Thomas .
NATURE GENETICS, 2007, 39 (01) :25-27
[7]   The Genetics of Autism: Key Issues, Recent Findings, and Clinical Implications [J].
El-Fishawy, Paul ;
State, Matthew W. .
PSYCHIATRIC CLINICS OF NORTH AMERICA, 2010, 33 (01) :83-+
[8]   Isolation of a novel human homologue of the gene coding for echinoderm microtubule-associated protein (EMAP) from the Usher syndrome type 1a locus at 14q32 [J].
Eudy, JD ;
MaEdmonds, M ;
Yao, SF ;
Talmadge, CB ;
Kelley, PM ;
Weston, MD ;
Kimberling, WJ ;
Sumegi, J .
GENOMICS, 1997, 43 (01) :104-106
[9]   The Simons Simplex Collection: A Resource for Identification of Autism Genetic Risk Factors [J].
Fischbach, Gerald D. ;
Lord, Catherine .
NEURON, 2010, 68 (02) :192-195
[10]   Genetics of autism: Complex aetiology for a heterogeneous disorder [J].
Folstein, SE ;
Rosen-Sheidley, B .
NATURE REVIEWS GENETICS, 2001, 2 (12) :943-955