Electrostatic correlations and fluctuations for ion binding to a finite length polyelectrolyte

被引:127
作者
Tan, ZJ
Chen, SJ [1 ]
机构
[1] Univ Missouri, Dept Phys & Astron, Columbia, MO 65211 USA
[2] Univ Missouri, Dept Biochem, Columbia, MO 65211 USA
关键词
D O I
10.1063/1.1842059
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A statistical mechanical model is presented which explicitly accounts for the fluctuations, the electrostatic, and the excluded volume correlations for ions bound to a polyelectrolyte such as DNA. The method can be employed to treat a wide range of ionic conditions including multivalent ions. The microscopic framework of the theory permits the use of realistic finite length and grooved structural model for the polyelectrolyte and modeling of the finite size of the bound ions. Test against Monte Carlo simulations suggests that the theory can give accurate predictions for the ion distribution and the thermodynamic properties. For multivalent ions, the theory makes improved predictions as compared with the mean-field approach. Moreover, for long polyelectrolyte and dilute salt concentration, the theory predicts ion binding properties that agree with the counterion condensation theory. (C) 2005 American Institute of Physics.
引用
收藏
页数:16
相关论文
共 92 条
[1]   Ionic distribution around simple B-DNA models. III. The effect of ionic charge [J].
Abascal, JLF ;
Montoro, JCG .
JOURNAL OF CHEMICAL PHYSICS, 2001, 114 (09) :4277-4284
[2]   Adsorption of monovalent and multivalent cations and anions on DNA molecules -: art. no. 061903 [J].
Allahyarov, E ;
Löwen, H ;
Gompper, G .
PHYSICAL REVIEW E, 2003, 68 (06)
[3]   PREDICTION OF PH-DEPENDENT PROPERTIES OF PROTEINS [J].
ANTOSIEWICZ, J ;
MCCAMMON, JA ;
GILSON, MK .
JOURNAL OF MOLECULAR BIOLOGY, 1994, 238 (03) :415-436
[4]   Simple model for attraction between like-charged polyions [J].
Arenzon, JJ ;
Stilck, JF ;
Levin, Y .
EUROPEAN PHYSICAL JOURNAL B, 1999, 12 (01) :79-82
[5]   OPTIMIZED PARAMETERS FOR A-DNA AND B-DNA [J].
ARNOTT, S ;
HUKINS, DWL .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1972, 47 (06) :1504-&
[6]   IONIC ATMOSPHERE OF RODLIKE POLY-ELECTROLYTES - A HYPERNETTED CHAIN STUDY [J].
BACQUET, R ;
ROSSKY, PJ .
JOURNAL OF PHYSICAL CHEMISTRY, 1984, 88 (12) :2660-2669
[7]   Electrostatics of nanosystems: Application to microtubules and the ribosome [J].
Baker, NA ;
Sept, D ;
Joseph, S ;
Holst, MJ ;
McCammon, JA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (18) :10037-10041
[8]   STRUCTURE AND THERMODYNAMICS OF MICELLAR SOLUTIONS IN THE MODIFIED POISSON-BOLTZMANN THEORY [J].
BHUIYAN, LB ;
OUTHWAITE, CW ;
BRATKO, D .
CHEMICAL PHYSICS LETTERS, 1992, 193 (04) :203-210
[9]  
Bloomfield VA, 1997, BIOPOLYMERS, V44, P269, DOI 10.1002/(SICI)1097-0282(1997)44:3<269::AID-BIP6>3.0.CO
[10]  
2-T