Elastic Modeling of biomembranes and lipid bilayers

被引:108
作者
Brown, Frank L. H. [1 ,2 ]
机构
[1] Univ Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
[2] Univ Calif Santa Barbara, Dept Phys, Santa Barbara, CA 93106 USA
关键词
statistical mechanics; biophysics; stochastic dynamics; Brownian dynamics simulation; hydrodynamics;
D O I
10.1146/annurev.physchem.59.032607.093550
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The simulation of biological membranes over length and time scales relevant to cellular biology is not currently feasible using conventional (fully atomic or molecularly detailed) simulation strategies. Given the wide disparity between what is possible on today's computers and the problems one might like to study, it seems unlikely this situation will change for several decades. An appealing alternative to traditional computational approaches is to employ simpler, continuum-based models developed within the frameworks of elasticity theory, fluid dynamics, and statistical mechanics. Although such models have seen wide use in analytical descriptions of membrane behavior, the extension of these methods to more general situations and numerical analysis is just beginning to be explored. This article reviews continuum models for membrane behavior with an emphasis on the use of such models in computational studies. Two applications are explored to demonstrate the utility of this level of coarse-grained modeling.
引用
收藏
页码:685 / 712
页数:28
相关论文
共 145 条
[51]  
HELFRICH W, 1978, Z NAT, V33, pA305
[53]  
JAMNEY P, 1995, STRUCTURE DYNAMICS B, V1, P805
[54]   Hydrodynamic damping of membrane thermal fluctuations near surfaces imaged by fluorescence interference microscopy [J].
Kaizuka, Y ;
Groves, JT .
PHYSICAL REVIEW LETTERS, 2006, 96 (11) :1-4
[55]   Structure and dynamics of supported intermembrane junctions [J].
Kaizuka, Y ;
Groves, JT .
BIOPHYSICAL JOURNAL, 2004, 86 (02) :905-912
[56]   The geometry of soft materials: a primer [J].
Kamien, RD .
REVIEWS OF MODERN PHYSICS, 2002, 74 (04) :953-971
[57]   Curvature-mediated interactions between membrane proteins [J].
Kim, KS ;
Neu, J ;
Oster, G .
BIOPHYSICAL JOURNAL, 1998, 75 (05) :2274-2291
[58]   SPINODAL DECOMPOSITION IN BINARY FLUIDS - EFFECTS OF HYDRODYNAMIC INTERACTIONS [J].
KOGA, T ;
KAWASAKI, K .
PHYSICAL REVIEW A, 1991, 44 (02) :R817-R820
[59]  
KOPPEL DE, 2001, P NATL ACAD SCI USA, V78, P3576
[60]   Lateral diffusion of receptor-ligand bonds in membrane adhesion zones:: Effect of thermal membrane roughness [J].
Krobath, H. ;
Schuetz, G. J. ;
Lipowsky, R. ;
Weikl, T. R. .
EPL, 2007, 78 (03)