Opportunities for genetic investigation afforded by Acinetobacter baylyi, a nutritionally versatile bacterial species that is highly competent for natural transformation

被引:86
作者
Young, DM [1 ]
Parke, D
Ornston, LN
机构
[1] Harvard Univ, Sch Med, Dept Microbiol & Mol Genet, Boston, MA 02115 USA
[2] Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA
关键词
catabolism; genetic islands; mutation; transmembrane trafficking;
D O I
10.1146/annurev.micro.59.051905.105823
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The genetic and physiological properties of Acinetobacter baylyi strain ADP1 make it an inviting subject for investigation of the properties underlying its nutritional versatility. The organism possesses a relatively small genome in which genes for most catabolic functions are clustered in several genetic islands that, unlike pathogenicity islands, give little evidence of horizontal transfer. Coupling mutagenic polymerase chain reaction to natural transformation provides insight into how structure influences function in transporters, transcriptional regulators, and enzymes. With appropriate selection, mutants in which such molecules have acquired novel function may be obtained. The extraordinary competence of A. baylyi for natural transformation and the ease with which it expresses heterologous genes make it a promising platform for construction of novel metabolic systems. Steps toward this goal should take into account the complexity of existing pathways in which transmembrane trafficking plays a significant role.
引用
收藏
页码:519 / 551
页数:33
相关论文
共 214 条
[21]   Diverse organization of genes of the β-ketoadipate pathway in members of the marine Roseobacter lineage [J].
Buchan, A ;
Neidle, EL ;
Moran, MA .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 70 (03) :1658-1668
[22]   Production of wood decay enzymes, loss of mass, and lignin solubilization in wood by diverse tropical freshwater fungi [J].
Bucher, VVC ;
Pointing, SB ;
Hyde, KD ;
Reddy, CA .
MICROBIAL ECOLOGY, 2004, 48 (03) :331-337
[23]   Similarities between the antABC-encoded anthranilate dioxygenase and the benABC-encoded benzoate dioxygenase of Acinetobacter sp. strain ADP1 [J].
Bundy, BM ;
Campbell, AL ;
Neidle, EL .
JOURNAL OF BACTERIOLOGY, 1998, 180 (17) :4466-4474
[24]  
Busch S, 1999, APPL ENVIRON MICROB, V65, P4568
[25]   REGULATION OF ENZYMES OF BETA-KETOADIPATE PATHWAY IN MORAXELLA CALCOACETICA .4. CONSTITUTIVE SYNTHESIS OF BETA-KETOADIPATE SUCCINYL-COA TRANSFERASES 2 AND 3 [J].
CANOVAS, JL ;
JOHNSON, BF .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1968, 3 (03) :312-&
[26]   REGULATION OF ENZYMES OF BETA-KETOADIPATE PATHWAY IN MORAXELLA CALCOACETICA .2. ROLE OF PROTOCATECHUATE AS INDUCER [J].
CANOVAS, JL ;
WHEELIS, ML ;
STANIER, RY .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1968, 3 (03) :293-&
[27]   REGULATION OF ENZYMES OF BETA-KETOADIPATE PATHWAY IN MORAXELLA CALCOACETICA .I. GENERAL ASPECTS [J].
CANOVAS, JL ;
STANIER, RY .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1967, 1 (03) :289-&
[28]   Seven novel species of Acinetobacter isolated from activated sludge [J].
Carr, EL ;
Kämpfer, P ;
Patel, BKC ;
Gürtler, V ;
Seviour, RJ .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2003, 53 :953-963
[29]   TRANSDUCTION AND CLUSTERING OF GENES IN FLUORESCENT PSEUDOMONADS [J].
CHAKRABARTY, AM ;
GUNSALUS, CF ;
GUNSALUS, IC .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1968, 60 (01) :168-+
[30]  
Chastre J, 2000, Semin Respir Infect, V15, P287