A matrix associated region localizes the human SOCS-1 gene to chromosome 16p13.13

被引:14
作者
Kramer, JA
Adams, MD
Singh, GB
Doggett, NA
Krawetz, SA
机构
[1] Wayne State Univ, Sch Med, Ctr Mol Med & Genet, Dept Obstet & Gynecol, Allen Park, MI 48101 USA
[2] Oakland Univ, Dept Comp Sci & Engn, Rochester, MI 48309 USA
[3] Univ Calif Los Alamos Natl Lab, Ctr Human Genome Studies, Los Alamos, NM 87545 USA
关键词
D O I
10.1023/B:SCAM.0000007115.58601.87
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The MarFinder algorithm was applied to a newly sequenced segment of 16p13,13 abutting the 3' end of the human PRM1 --> PRM2 --> TNP2 locus. A candidate region of matrix attached was identified. Subsequent biophysical analysis showed that this region was attached to the somatic nuclear matrix. Nucleotide sequence analysis also revealed the presence of a CpG island. Data base queries showed that this region contained the SOCS-1 gene. Thus, the SOCS-1 gene is bounded by a somatic MAR and is just 3' of the spermatid-expressed PRM1 --> PRM2 --> TNP2 domain at position 16p13.13.
引用
收藏
页码:131 / 133
页数:3
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