A comparative genetic map of the turkey genome

被引:32
作者
Reed, KM
Chaves, LD
Hall, MK
Knutson, TP
Harry, DE
机构
[1] Univ Minnesota, Dept Vet & Biomed Sci, St Paul, MN 55108 USA
[2] Genet Fdn, Napa, CA USA
关键词
D O I
10.1159/000086380
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Genetic markers (microsatellites and SNPs) were used to create and compare maps of the turkey and chicken genomes. A physical map of the chicken genome was built by comparing sequences of turkey markers with the chicken whole-genome sequence by BLAST analysis. A genetic linkage map of the turkey genome (Meleagris gallopavo) was developed by segregation analysis of genetic markers within the University of Minnesota/Nicholas Turkey Breeding Farms (UMN/ NTBF) resource population. This linkage map of the turkey genome includes 314 loci arranged into 29 linkage groups. An additional 40 markers are tentatively placed within linkage groups based on two-point LOD scores and 16 markers remain unlinked. Total map distance contained within linkage groups is 2,011 cM with the longest linkage group (47 loci) measuring 413.3 cM. Average marker interval over the 29 linkage groups was 6.4 cM. All but one turkey linkage group could be aligned with the physical map of the chicken genome. The present genetic map of the turkey provides a comparative framework for future genomic studies. Copyright (c) 2005 S. Karger AG, Basel.
引用
收藏
页码:118 / 127
页数:10
相关论文
共 30 条
[1]   Comparison of the chicken and turkey genomes reveals a higher rate of nucleotide divergence on microchromosomes than macrochromosomes [J].
Axelsson, E ;
Webster, MT ;
Smith, NGC ;
Burt, DW ;
Ellegren, H .
GENOME RESEARCH, 2005, 15 (01) :120-125
[2]   The chicken genome and the developmental biologist [J].
Burt, DW .
MECHANISMS OF DEVELOPMENT, 2004, 121 (09) :1129-1135
[3]   Preliminary linkage map of the Turkey (Meleagris gallopavo) based on microsatellite markers [J].
Burt, DW ;
Morrice, DR ;
Sewalem, A ;
Smith, J ;
Paton, IR ;
Smith, EJ ;
Bentley, J ;
Hocking, PM .
ANIMAL GENETICS, 2003, 34 (06) :399-409
[4]  
Chaves LD, 2005, GENOME, V48, P12, DOI [10.1139/g04-088, 10.1139/G04-088]
[5]   Myosin light chain genes in the turkey (Meleagris gallopavo) [J].
Chaves, LD ;
Ostroski, BJ ;
Reed, KM .
CYTOGENETIC AND GENOME RESEARCH, 2003, 102 (1-4) :340-346
[6]   CARDIOMYOPATHY IN TURKEYS [J].
CZARNECKI, CM .
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY, 1984, 77 (04) :591-598
[7]   Chicken genome sequence: a centennial gift to poultry genetics [J].
Dodgson, JB .
CYTOGENETIC AND GENOME RESEARCH, 2003, 102 (1-4) :291-296
[8]   Turkey microsatellite loci from an embryonic cDNA library [J].
Dranchak, PK ;
Chaves, LD ;
Rowe, JA ;
Reed, KM .
POULTRY SCIENCE, 2003, 82 (04) :526-531
[9]  
GARBE JR, 2003, LOCUSMAP USER MANUAL
[10]  
Green P., 1990, DOCUMENTATION CRI MA