A Hough transform global probabilistic approach to multiple-subject diffusion MRI tractography

被引:103
作者
Aganj, Iman [1 ]
Lenglet, Christophe [1 ,2 ]
Jahanshad, Neda [3 ]
Yacoub, Essa [2 ]
Harel, Noam [2 ]
Thompson, Paul M. [3 ]
Sapiro, Guillermo [1 ]
机构
[1] Univ Minnesota, Dept Elect & Comp Engn, Minneapolis, MN 55455 USA
[2] Univ Minnesota, Ctr Magnet Resonance Res, Minneapolis, MN 55455 USA
[3] Univ Calif Los Angeles, Lab Neuro Imaging, Sch Med, Los Angeles, CA 90095 USA
关键词
Tractography; Diffusion-weighted magnetic resonance imaging (DWI); Hough transform; Orientation distribution function (ODF); Population studies; WHITE-MATTER TRACTOGRAPHY; FIBER TRACKING; ANATOMICAL CONNECTIVITY; BRAIN CONNECTIVITY; FRONT EVOLUTION; TENSOR; RECONSTRUCTION; BOOTSTRAP; FRAMEWORK;
D O I
10.1016/j.media.2011.01.003
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
A global probabilistic fiber tracking approach based on the voting process provided by the Hough transform is introduced in this work. The proposed framework tests candidate 3D curves in the volume, assigning to each one a score computed from the diffusion images, and then selects the curves with the highest scores as the potential anatomical connections. The algorithm avoids local minima by performing an exhaustive search at the desired resolution. The technique is easily extended to multiple subjects, considering a single representative volume where the registered high-angular resolution diffusion images (HARDI) from all the subjects are non-linearly combined, thereby obtaining population-representative tracts. The tractography algorithm is run only once for the multiple subjects, and no tract alignment is necessary. We present experimental results on HARDI volumes, ranging from simulated and 1.5T physical phantoms to 7T and 4T human brain and 7T monkey brain datasets. (C) 2011 Elsevier B.V. All rights reserved.
引用
收藏
页码:414 / 425
页数:12
相关论文
共 62 条
[11]   Flow-based fiber tracking with diffusion tensor and q-ball data: Validation and comparison to principal diffusion direction techniques [J].
Campbell, JSW ;
Siddiqi, K ;
Rymar, VV ;
Sadikot, AF ;
Pike, GB .
NEUROIMAGE, 2005, 27 (04) :725-736
[12]  
CHIANG MC, 2008, P 11 MICCAI NEW YORK
[13]   Tracking neuronal fiber pathways in the living human brain [J].
Conturo, TE ;
Lori, NF ;
Cull, TS ;
Akbudak, E ;
Snyder, AZ ;
Shimony, JS ;
McKinstry, RC ;
Burton, H ;
Raichle, ME .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (18) :10422-10427
[14]  
COOK P., 2006, 14 SCI M INT SOC MAG, V2759
[15]   Meeting the Challenges of Neuroimaging Genetics [J].
de Zubicaray, Greig I. ;
Chiang, Ming-Chang ;
McMahon, Katie L. ;
Shattuck, David W. ;
Toga, Arthur W. ;
Martin, Nicholas G. ;
Wright, Margaret J. ;
Thompson, Paul M. .
BRAIN IMAGING AND BEHAVIOR, 2008, 2 (04) :258-263
[16]   Regularized, fast, and robust analytical Q-Ball imaging [J].
Descoteaux, Maxime ;
Angelino, Elaine ;
Fitzgibbons, Shaun ;
Deriche, Rachid .
MAGNETIC RESONANCE IN MEDICINE, 2007, 58 (03) :497-510
[17]   Deterministic and Probabilistic Tractography Based on Complex Fibre Orientation Distributions [J].
Descoteaux, Maxime ;
Deriche, Rachid ;
Knoesche, Thomas R. ;
Anwander, Alfred .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2009, 28 (02) :269-286
[18]   USE OF HOUGH TRANSFORMATION TO DETECT LINES AND CURVES IN PICTURES [J].
DUDA, RO ;
HART, PE .
COMMUNICATIONS OF THE ACM, 1972, 15 (01) :11-&
[19]  
ELKOUBY V, 2005, P 8 MICCAI PALM SPRI
[20]  
FILLARD P, 2009, P 12 MICCAI LOND