Molecular characterisation of Banana mild mosaic virus, a new filamentous virus in Musa spp. -: Brief report

被引：18

作者：

Gambley, CF ^{[1
]}

Thomas, JE ^{[1
]}

机构：

[1] Queensland Hort Inst, Dept Primary Ind, Indooroopilly, Qld 4068, Australia

来源：

ARCHIVES OF VIROLOGY | 2001年 / 146卷 / 07期

关键词：

D O I：

10.1007/s007050170097

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

Banana mild mosaic virus (BanMMV) is a previously undescribed filamentous virus infecting Musa spp. The complete genome has been sequenced from PCR clones and consists of 7352 nucleotides, encoding five open reading frames (ORFs) of 205, 25.5, 12.4, 8.0 and 26.8 kDa, respectively. BanMMV was most closely related to fovea- and carlaviruses, based on phylogenetic analysis using a portion of the viral replicase. Analysis of other parts of the genome revealed similarities with fovea-, carla- and potexviruses, but the virus was not clearly aligned to any previously recognised genus.

引用

页码：1369 / 1379

页数：11

共 41 条

[1] Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].

Altschul, SF ;

Madden, TL ;

Schaffer, AA ;

Zhang, JH ;

Zhang, Z ;

Miller, W ;

Lipman, DJ .

NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402

[2]

[Anonymous], 2000, VIRUS TAXONOMY 7 REP

[3] THE ENTIRE NUCLEOTIDE-SEQUENCE OF FOXTAIL MOSAIC-VIRUS RNA [J].

BANCROFT, JB ;

ROULEAU, M ;

JOHNSTON, R ;

PRINS, L ;

MACKIE, GA .

JOURNAL OF GENERAL VIROLOGY, 1991, 72 :2173-2181

[4] TRIPLE GENE BLOCK PROTEINS OF WHITE CLOVER MOSAIC POTEXVIRUS ARE REQUIRED FOR TRANSPORT [J].

BECK, DL ;

GUILFORD, PJ ;

VOOT, DM ;

ANDERSEN, MT ;

FORSTER, RLS .

VIROLOGY, 1991, 183 (02) :695-702

[5] Identification of sugarcane striate mosaic-associated virus by partial characterization of its double-stranded RNA [J].

Choi, YG ;

Croft, BJ ;

Randles, JW .

PHYTOPATHOLOGY, 1999, 89 (10) :877-883

[6] A COMPREHENSIVE SET OF SEQUENCE-ANALYSIS PROGRAMS FOR THE VAX [J].

DEVEREUX, J ;

HAEBERLI, P ;

SMITHIES, O .

NUCLEIC ACIDS RESEARCH, 1984, 12 (01) :387-395

[7] PHYLOGENY OF CAPSID PROTEINS OF ROD-SHAPED AND FILAMENTOUS RNA PLANT-VIRUSES - 2 FAMILIES WITH DISTINCT PATTERNS OF SEQUENCE AND PROBABLY STRUCTURE CONSERVATION [J].

DOLJA, VV ;

BOYKO, VP ;

AGRANOVSKY, AA ;

KOONIN, EV .

VIROLOGY, 1991, 184 (01) :79-86

[8] Abbreviations for plant virus names - 1999 [J].

Fauquet, MC ;

Mayo, MA .

ARCHIVES OF VIROLOGY, 1999, 144 (06) :1249-1273

[9]

Felsenstein J., 1993, PHYLIP PHYLOGENY INF

[10] CHARACTERIZATION OF THE COAT PROTEIN SUBGENOMIC RNA OF WHITE CLOVER MOSAIC-VIRUS [J].

FORSTER, RLS ;

GUILFORD, PJ ;

FAULDS, DV .

JOURNAL OF GENERAL VIROLOGY, 1987, 68 :181-190

← 1 2 3 4 5 →