Structure of Rab GDP-dissociation inhibitor in complex with prenylated YPT1 GTPase

被引:156
作者
Rak, A
Pylypenko, O
Durek, T
Watzke, A
Kushnir, S
Brunsveld, L
Waldmann, H
Goody, RS
Alexandrov, K
机构
[1] Max Planck Inst Mol Physiol, Dept Phys Biochem, D-44227 Dortmund, Germany
[2] Max Planck Inst Mol Physiol, Dept Biol Chem, D-44227 Dortmund, Germany
[3] Max Planck Inst Med Res, Dept Biomol Mech, D-69120 Heidelberg, Germany
[4] Univ Dortmund, Dept Organ Chem, D-44227 Dortmund, Germany
关键词
D O I
10.1126/science.1087761
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Rab/Ypt guanosine triphosphatases (GTPases) represent a family of key membrane traffic regulators in eukaryotic cells whose function is governed by the guanosine diphosphate (GDP) dissociation inhibitor (RabGDI). Using a combination of chemical synthesis and protein engineering, we generated and crystallized the monoprenylated Ypt1: RabGDI complex. The structure of the complex was solved to 1.5 angstrom resolution and provides a structural basis for the ability of RabGDI to inhibit the release of nucleotide by Rab proteins. Isoprenoid binding requires a conformational change that opens a cavity in the hydrophobic core of its domain II. Analysis of the structure provides a molecular basis for understanding a RabGDI mutant that causes mental retardation in humans.
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页码:646 / 650
页数:5
相关论文
共 25 条
[1]   Intein-mediated synthesis of geranylgeranylated Rab7 protein in vitro [J].
Alexandrov, K ;
Heinemann, I ;
Durek, T ;
Sidorovitch, V ;
Goody, RS ;
Waldmann, H .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (20) :5648-5649
[2]   Organization of the Rab-GDI/CHM superfamily: The functional basis for choroideremia disease [J].
Alory, C ;
Balch, WE .
TRAFFIC, 2001, 2 (08) :532-543
[3]   Geranylgeranyl switching regulates GDI-Rab GTPase recycling [J].
An, Y ;
Shao, Y ;
Alory, C ;
Matteson, J ;
Sakisaka, T ;
Chen, W ;
Gibbs, RA ;
Wilson, IA ;
Balch, WE .
STRUCTURE, 2003, 11 (03) :347-357
[4]   The structural basis of the activation of Ras by Sos [J].
Boriack-Sjodin, PA ;
Margarit, SM ;
Bar-Sagi, D ;
Kuriyan, J .
NATURE, 1998, 394 (6691) :337-343
[5]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[6]   HYPERVARIABLE C-TERMINAL DOMAIN OF RAB PROTEINS ACTS AS A TARGETING SIGNAL [J].
CHAVRIER, P ;
GORVEL, JP ;
STELZER, E ;
SIMONS, K ;
GRUENBERG, J ;
ZERIAL, M .
NATURE, 1991, 353 (6346) :769-772
[7]   Rab-subfamily-specific regions of Ypt7p are structurally different from other RabGTPases [J].
Constantinescu, AT ;
Rak, A ;
Alexandrov, K ;
Esters, H ;
Goody, RS ;
Scheldig, AJ .
STRUCTURE, 2002, 10 (04) :569-579
[8]   Mutations in GDI1 are responsible for X-linked non-specific mental retardation [J].
D'Adamo, P ;
Menegon, A ;
Lo Nigro, C ;
Grasso, M ;
Gulisano, M ;
Tamanini, F ;
Bienvenu, T ;
Gedeon, AK ;
Oostra, B ;
Wu, SK ;
Tandon, A ;
Valtorta, F ;
Balch, WE ;
Chelly, J ;
Toniolo, D .
NATURE GENETICS, 1998, 19 (02) :134-139
[9]   GDI1 ENCODES A GDP DISSOCIATION INHIBITOR THAT PLAYS AN ESSENTIAL ROLE IN THE YEAST SECRETORY PATHWAY [J].
GARRETT, MD ;
ZAHNER, JE ;
CHENEY, CM ;
NOVICK, PJ .
EMBO JOURNAL, 1994, 13 (07) :1718-1728
[10]   GDP dissociation inhibitor domain II required for Rab GTPase recycling [J].
Gilbert, PM ;
Burd, CG .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2001, 276 (11) :8014-8020