The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins

被引:717
作者
Kalinowski, J
Bathe, B
Bartels, D
Bischoff, N
Bott, M
Burkovski, A
Dusch, N
Eggeling, L
Eikmanns, BJ
Gaigalat, L
Goesmann, A
Hartmann, M
Huthmacher, K
Krämer, R
Linke, B
McHardy, AC
Meyer, F
Möckel, B
Pfefferle, W
Pühler, A
Rey, DA
Rückert, C
Rupp, O
Sahm, H
Wendisch, VF
Wiegräbe, I
Tauch, A
机构
[1] Univ Bielefeld, Inst Genomforsch, D-33615 Bielefeld, Germany
[2] Degussa AG, D-33788 Halle An Der Saale, Germany
[3] Forschungszentrum Julich, Inst Biotechnol 1, D-52425 Julich, Germany
[4] Univ Cologne, Inst Biochem, D-50674 Cologne, Germany
[5] Univ Ulm, Abt Mikrobiol & Biotechnol, D-89069 Ulm, Germany
[6] Univ Bielefeld, Lehrstuhl Genet, D-33615 Bielefeld, Germany
[7] Univ Bielefeld GmbH, Geschaftsbereich BioTech, Inst Innovat Tranfer, D-33615 Bielefeld, Germany
关键词
Corynebacterium glutamicum; amino acid production; vitamin production; genome sequence; bioinformatics;
D O I
10.1016/S0168-1656(03)00154-8
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The complete genomic sequence of Corynebacterium glutainicum ATCC 13032, well-known in industry for the production of amino acids, e.g. of L-glutamate and L-lysine was determined. The C glutamician genome was found to consist of a single circular chromosome comprising 3 282 708 base pairs. Several DNA regions of unusual composition were identified that were potentially acquired by horizontal gene transfer, e.g. a segment of DNA from C diphtheriae and a prophage-containing region. After automated and manual annotation, 3002 protein-coding genes have been identified, and to 2489 of these, functions were assigned by homologies to known proteins. These analyses confirm the taxonomic position of C glutamicum as related to Mycobacteria and show a broad metabolic diversity as expected for a bacterium living in the soil. As an example for biotechnological application the complete genome sequence was used to reconstruct the metabolic flow of carbon into a number of industrially important products derived from the amino acid L-aspartate. (C) 2003 Elsevier B.V. All rights reserved.
引用
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页码:5 / 25
页数:21
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