Good laboratory practice for clinical next-generation sequencing informatics pipelines

被引:96
作者
Gargis, Amy S. [1 ]
Kalman, Lisa [1 ]
Bick, David P. [2 ]
da Silva, Cristina [3 ]
Dimmock, David P. [2 ]
Funke, Birgit H. [4 ,5 ]
Gowrisankar, Sivakumar [4 ,5 ]
Hegde, Madhuri R. [3 ]
Kulkarni, Shashikant [6 ,7 ,8 ]
Mason, Christopher E. [9 ]
Nagarajan, Rakesh [8 ]
Voelkerding, Karl V. [10 ,11 ]
Worthey, Elizabeth A. [2 ]
Aziz, Nazneen [12 ]
Barnes, John [13 ]
Bennett, Sarah F. [14 ]
Bisht, Himani [15 ]
Church, Deanna M. [16 ]
Dimitrova, Zoya [17 ]
Gargis, Shaw R. [18 ]
Hafez, Nabil [19 ]
Hambuch, Tina [20 ]
Hyland, Fiona C. L. [21 ]
Luna, Ruth Ann [22 ,23 ]
MacCannell, Duncan [24 ]
Mann, Tobias [25 ]
McCluskey, Megan R. [26 ]
McDaniel, Timothy K. [27 ]
Ganova-Raeval, Lilia M. [17 ]
Rehm, Heidi L. [4 ,5 ]
Reid, Jeffrey [28 ]
Campo, David S. [17 ]
Resnick, Richard B. [19 ]
Ridge, Perry G. [10 ]
Salit, Marc L. [29 ]
Skums, Pavel [19 ]
Wong, Lee-Jun C. [27 ]
Zehnbauer, Barbara A. [1 ]
Zook, Justin M. [29 ]
Lubin, Ira M. [1 ]
机构
[1] Ctr Dis Control & Prevent, Div Lab Syst, Atlanta, GA USA
[2] Med Coll Wisconsin, Dept Pediat, Milwaukee, WI 53226 USA
[3] Emory Univ, Sch Med, Dept Human Genet, Atlanta, GA USA
[4] Partners Healthcare Personalized Med, Lab Mol Med, Cambridge, MA USA
[5] Harvard Univ, Sch Med, Dept Pathol, Boston, MA USA
[6] Washington Univ, Sch Med, Dept Genet, St Louis, MO 63110 USA
[7] Washington Univ, Sch Med, Dept Pediat, St Louis, MO 63110 USA
[8] Washington Univ, Sch Med, Dept Pathol & Immunol, St Louis, MO USA
[9] Cornell Univ, Dept Physiol & Biophys, New York, NY 10021 USA
[10] Univ Utah, Dept Pathol, Salt Lake City, UT USA
[11] Associated Reg & Univ Pathologists ARUP Labs, Inst Clin & Expt Pathol, Salt Lake City, UT USA
[12] Coll Amer Pathologists, Northfield, IL USA
[13] Ctr Dis Control & Prevent, Natl Ctr Immunizat & Resp Dis, Atlanta, GA USA
[14] Ctr Medicare & Medicaid Serv, Div Lab Serv, Baltimore, MD USA
[15] US FDA, Ctr Devices & Radiol Hlth, Silver Spring, MD USA
[16] NIH, Natl Ctr Biotechnol Informat, Bethesda, MD 20892 USA
[17] Ctr Dis Control & Prevent, Div Viral Hepatitis, Atlanta, GA USA
[18] Ctr Dis Control & Prevent, Div Select Agents & Toxins, Atlanta, GA USA
[19] GenomeQuest, Westborough, MA USA
[20] Illumina, Clin Serv, San Diego, CA USA
[21] Thermo Fisher Sci, San Francisco, CA USA
[22] Texas Childrens Hosp, Texas Childrens Microbiome Ctr, Houston, TX USA
[23] Baylor Coll Med, Dept Pathol & Immunol, Houston, TX 77030 USA
[24] Ctr Dis Control & Prevent, Natl Ctr Emerging & Zoonot Infect Dis, Atlanta, GA USA
[25] Illumina, San Diego, CA USA
[26] SoftGenetics, State Coll, State Coll, PA USA
[27] Illumina, Oncol, San Diego, CA USA
[28] Baylor Coll Med, Dept Mol & Human Genet, Houston, TX 77030 USA
[29] NIST, Mat Measurement Lab, Gaithersburg, MD 20899 USA
关键词
ACMG RECOMMENDATIONS; INCIDENTAL FINDINGS; STANDARDS;
D O I
10.1038/nbt.3237
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
引用
收藏
页码:689 / 693
页数:5
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