GenBank

被引：154

作者：

Benson, Dennis A. ^{[1
]}

Karsch-Mizrachi, Ilene ^{[1
]}

Lipman, David J. ^{[1
]}

Ostell, James ^{[1
]}

Wheeler, David L. ^{[1
]}

机构：

[1] Natl Inst Hlth, Natl Ctr Biotechnol Informat, Natl Lib Med, Bethesda, MD 20894 USA

来源：

NUCLEIC ACIDS RESEARCH | 2008年 / 36卷

基金：

美国国家卫生研究院;

关键词：

D O I：

10.1093/nar/gkm929

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

GenBank (R) is a comprehensive database that contains publicly available nucleotide sequences for more than 260 000 named organisms, obtained primarily through submissions from individual laboratories and batch submissions from large-scale sequencing projects. Most submissions are made using the web-based BankIt or standalone Sequin programs and accession numbers are assigned by GenBank staff upon receipt. Daily data exchange with the European Molecular Biology Laboratory Nucleotide Sequence Database in Europe and the DNA Data Bank of Japan ensures worldwide coverage. GenBank is accessible through NCBIs retrieval system, Entrez, which integrates data from the major DNA and protein sequence databases along with taxonomy, genome, mapping, protein structure and domain information, and the biomedical journal literature via PubMed. BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP. To access GenBank and its related retrieval and analysis services, begin at the NCBI Homepage: www.ncbi.nlm.nih.gov.

引用

页码：D25 / D30

页数：6

共 12 条

[11] BLAST: improvements for better sequence analysis [J].

Ye, Jian ;

McGinnis, Scott ;

Madden, Thomas L. .

NUCLEIC ACIDS RESEARCH, 2006, 34 :W6-W9

[12] Protein sequence similarity searches using patterns as seeds [J].

Zhang, Z ;

Schaffer, AA ;

Miller, W ;

Madden, TL ;

Lipman, DJ ;

Koonin, EV ;

Altschul, SF .

NUCLEIC ACIDS RESEARCH, 1998, 26 (17) :3986-3990

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