Estimation of the optimal data base size for structure-activity analyses: The Salmonella mutagenicity data base

被引:38
作者
Liu, M
Sussman, N
Klopman, G
Rosenkranz, HS
机构
[1] UNIV PITTSBURGH,DEPT ENVIRONM & OCCUPAT HLTH,PITTSBURGH,PA 15213
[2] CASE WESTERN RESERVE UNIV,DEPT CHEM,CLEVELAND,OH 44106
关键词
Structure-Activity Relationship (SAR); Salmonella mutagenicity; modeling; data base;
D O I
10.1016/0027-5107(96)00111-X
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
In the present study, the effects of data base size on predictivity, informational content and structural overlap of derived Structure-Activity Relationship (SAR) models were investigated. It was found thai indices of predictivity (i.e., sensitivity, specificity, and concordance between experimental and predicted results (OCP)) increased with increasing size of the data base until the range is 300-400 chemicals, at which point they plateau. The greater the size of the data base, the greater the informational content of the model; however, the rate of this increase is no longer optimal when the size of the data base exceeds 400 chemicals.
引用
收藏
页码:63 / 72
页数:10
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