Protein variety and functional diversity: Swiss-Prot annotation in its biological context

被引:77
作者
Boeckmann, B
Blatter, MC
Famiglietti, L
Hinz, U
Lane, L
Roechert, B
Bairoch, A
机构
[1] Ctr Med Univ Geneva, Swiss Inst Bioinformat, CH-1211 Geneva, Switzerland
[2] Ctr Med Univ Geneva, Dept Struct Biol & Bioinformat, CH-1211 Geneva, Switzerland
关键词
protein database; annotation; protein synthesis; sequence variety post-translational modification; protein-protein interaction; disease;
D O I
10.1016/j.crvi.2005.06.001
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
We all know that the dogma 'one gene, one protein' is obsolete. A functional protein and, likewise, a protein's ultimate function depend not only on the underlying genetic information but also on the ongoing conditions of the cellular system. Frequently the transcript, like the polypeptide, is processed in multiple ways, but only one or a few out of a multitude of possible variants are produced at a time. An overview on processes that can lead to sequence variety and structural diversity in eukaryotes is given. The UniProtKB/Swiss-Prot protein knowledgebase provides a wealth of information regarding protein variety, function and associated disorders. Examples for such annotation are shown and further ones are available at http://www.expasy.org/sprot/tutorial/examples_CRB. To cite this article: B. Boeckmann et al., C R. Biologies 328 (2005). (c) 2005 Acadamie des sciences. Published by Elsevier SAS. All rights reserved.
引用
收藏
页码:882 / 899
页数:18
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