Nucleotide deoxysugars: Essential tools for the glycosylation engineering of novel bioactive compounds

被引:67
作者
Rupprath, C [1 ]
Schumacher, T [1 ]
Elling, L [1 ]
机构
[1] Univ Aachen, Rhein Westfal TH Aachen, Helmholtz Inst Biomed Engn, Dept Biotechnol Biomat Sci, D-52056 Aachen, Germany
关键词
nucleotide deoxysugars; enzymatic synthesis; macrolide antibiotics; dTDP-deoxyhexoses; glycosyltransferases; chemoenzymatic synthesis; combinatorial biocatalysis;
D O I
10.2174/0929867054367167
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The irreversible spread of new resistance mechanisms against existing therapeutical antibiotics has led to the development of technologies and strategies for the glycosylation engineering of novel antibiotics. Amino-, C-branched and O-methylated 6-deoxyhexoses play a favourite role in the biosynthesis of clinically important antibiotics like tylosin, erythromycin or oleandomycin and are essential for the antibiotic activity. They are transferred onto the aglycon by glycosyltransferases using dTDP-activated deoxyhexoses. The in vitro biochemical characterization of the biosynthetic enzymes and the glycosyltransferases are, however, hampered due to the poor synthetic access to dTDP-activated deoxysugars and their biosynthetic intermediates. The overcoming of the poor availability of dTDP-activated sugars was the target of several researchers to fulfil their distinct aims with these sugars which were mostly involved in the synthesis of different biological active compounds. Several completely different strategies were used in the past years to improve the availability of dTDP-activated deoxysugars, varying from complete enzymatic synthesis via syntheses using reaction technology for yield optimization to full organic synthesis or shortcuts like the decomposition of commercially available antibiotics and later chemical activation of the sugar moieties. This review gives a survey of the synthesis of dTDP-activated sugars by chemical and chemoenzymatic approaches and discusses the promiscuity of glycosyltransferases to evaluate the chances for applying them for the production of new bioactive compounds. It summarizes the most important enzymes in the field of synthesis using biosynthetic pathway enzymes and describes solutions for occurring challenges during application. Finally, this review will give a survey about the availability of dTDP-activated sugars in sufficient scale and will also point at important sugars which are still bottlenecks and difficult to synthesize and therefore should become a target for enhanced research efforts.
引用
收藏
页码:1637 / 1675
页数:39
相关论文
共 233 条
[1]   Identification and expression of genes involved in biosynthesis of L-oleandrose and its intermediate L-olivose in the oleandomycin producer Streptomyces antibioticus [J].
Aguirrezabalaga, I ;
Olano, C ;
Allende, N ;
Rodriguez, L ;
Braña, AF ;
Méndez, C ;
Salas, JA .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2000, 44 (05) :1266-1275
[2]   Substrate specificity of NovM: Implications for novobiocin biosynthesis and glycorandomization [J].
Albermann, C ;
Soriano, A ;
Jiang, JQ ;
Vollmer, H ;
Biggins, JB ;
Barton, WA ;
Lesniak, J ;
Nikolov, DB ;
Thorson, JS .
ORGANIC LETTERS, 2003, 5 (06) :933-936
[3]   Preparative synthesis of GDP-β-L-fucose by recombinant enzymes from enterobacterial sources [J].
Albermann, C ;
Distler, J ;
Piepersberg, W .
GLYCOBIOLOGY, 2000, 10 (09) :875-881
[4]   The purification, crystallization and structural elucidation of dTDP-D-glucose 4,6-dehydratase (RmIB), the second enzyme of the dTDP-L-rhamnose synthesis pathway from Salmonella enterica serovar Typhimurium [J].
Allard, STM ;
Giraud, MF ;
Whitfield, C ;
Messner, P ;
Naismith, JH .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2000, 56 :222-225
[5]   Toward a structural understanding of the dehydratase mechanism [J].
Allard, STM ;
Beis, K ;
Giraud, MF ;
Hegeman, AD ;
Gross, JW ;
Wilmouth, RC ;
Whitfield, C ;
Graninger, M ;
Messner, P ;
Allen, AG ;
Maskell, DJ ;
Naismith, JH .
STRUCTURE, 2002, 10 (01) :81-92
[6]   Epimerases: structure, function and mechanism [J].
Allard, STM ;
Giraud, MF ;
Naismith, JH .
CELLULAR AND MOLECULAR LIFE SCIENCES, 2001, 58 (11) :1650-1665
[7]   The crystal structure of dTDP-D-glucose 4,6-dehydratase (RmlB) from Salmonella enterica serovar typhimurium, the second enzyme in the dTDP-L-rhamnose pathway [J].
Allard, STM ;
Giraud, MF ;
Whitfield, C ;
Graninger, M ;
Messner, P ;
Naismith, JH .
JOURNAL OF MOLECULAR BIOLOGY, 2001, 307 (01) :283-295
[8]   (Chemo)enzymatic synthesis of dTDP-activated 2,6-dideoxysugars as building blocks of polyketide antibiotics [J].
Amann, S ;
Dräger, G ;
Rupprath, C ;
Kirschning, A ;
Elling, L .
CARBOHYDRATE RESEARCH, 2001, 335 (01) :23-32
[9]   STREPTOMYCES-LIVIDANS AS HOST FOR HETEROLOGOUS PROTEIN-PRODUCTION [J].
ANNE, J ;
VANMELLAERT, L .
FEMS MICROBIOLOGY LETTERS, 1993, 114 (02) :121-128
[10]  
[Anonymous], 2002, MMWR MORB MORTAL WKL, V51, P565