Laying a Community-Based Foundation for Data-Driven Semantic Standards in Environmental Health Sciences

被引:16
作者
Mattingly, Carolyn J. [1 ,2 ]
Boyles, Rebecca [3 ]
Lawler, Cindy P. [3 ]
Haugen, Astrid C. [3 ]
Dearry, Allen [3 ]
Haendel, Melissa [4 ,5 ]
机构
[1] North Carolina State Univ, Dept Biol Sci, Campus Box 7633, Raleigh, NC 27695 USA
[2] North Carolina State Univ, Ctr Human Hlth & Environm, Raleigh, NC USA
[3] NIEHS, NIH, Dept Hlth & Human Serv, POB 12233, Res Triangle Pk, NC 27709 USA
[4] Oregon Hlth & Sci Univ, Lib, Portland, OR 97201 USA
[5] Oregon Hlth & Sci Univ, Dept Med Informat & Clin Epidemiol, Portland, OR 97201 USA
基金
美国国家卫生研究院;
关键词
ANTIBIOTIC-RESISTANCE; ONTOLOGY; BIOLOGY; UNIFICATION; KNOWLEDGE; PROJECT; DISEASE;
D O I
10.1289/ehp.1510438
中图分类号
X [环境科学、安全科学];
学科分类号
083001 [环境科学];
摘要
BACKGROUND: Despite increasing availability of environmental health science (EHS) data, development, and implementation of relevant semantic standards, such as ontologies or hierarchical vocabularies, has lagged. Consequently, integration and analysis of information needed to better model environmental influences on human health remains a significant challenge. OBJECTIVES: We aimed to identify a committed community and mechanisms needed to develop EHS semantic standards that will advance understanding about the impacts of environmental exposures on human disease. METHODS: The National Institute of Environmental Health Sciences sponsored the "Workshop for the Development of a Framework for Environmental Health Science Language" hosted at North Carolina State University on 15-16 September 2014. Through the assembly of data generators, users, publishers, and funders, we aimed to develop a foundation for enabling the development of community-based and data-driven standards that will ultimately improve standardization, sharing, and interoperability of EHS information. DISCUSSION: Creating and maintaining an EHS common language is a continuous and iterative process, requiring community building around research interests and needs, enabling integration and reuse of existing data, and providing a low barrier of access for researchers needing to use or extend such a resource. CONCLUSIONS: Recommendations included developing a community-supported web-based toolkit that would enable a) collaborative development of EHS research questions and use cases, b) construction of user-friendly tools for searching and extending existing semantic resources, c) education and guidance about standards and their implementation, and d) creation of a plan for governance and sustainability.
引用
收藏
页码:1136 / 1140
页数:5
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