DFT-SQM force field for cobalt corrinoids

被引:27
作者
Andruniow, T
Zgierski, MZ
Kozlowski, PM [1 ]
机构
[1] Univ Louisville, Dept Chem, Louisville, KY 40292 USA
[2] Natl Res Council Canada, Steacie Inst Mol Sci, Ottawa, ON K1A 0R6, Canada
关键词
D O I
10.1016/S0009-2614(00)01210-0
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
This Letter introduces a systematic development of a quantitative vibrational force field (FF) capable of modeling vibrational spectra of cobalt corrinoids (B-12 derivatives). The scaled quantum mechanical (SQM) method is used to refine density functional theory (DFT) based force constants calculated at the B3LYP level of theory. The reliability of the DFT-SQM FF for cobalt corrinoids is tested on a six-coordinate methylcobalamin Im-[Co-III-corrin]-CH3 model. It is shown that the computed frequencies and Raman intensities permit detailed vibrational assignment. This analysis illustrates the utility of DFT-SQM FF in making detailed connections between the structure of cobalt corrinoids and their vibrational spectra, (C) 2000 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:502 / 508
页数:7
相关论文
共 36 条
[11]   IRON-LIGAND STRETCHING BAND IN THE RESONANCE RAMAN-SPECTRA OF FERROUS IRON PORPHYRIN DERIVATIVES - IMPORTANCE AS A PROBE BAND FOR QUATERNARY STRUCTURE OF HEMOGLOBIN [J].
HORI, H ;
KITAGAWA, T .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1980, 102 (10) :3608-3613
[12]   Scaled quantum mechanical and experimental vibrational spectra of magnesium and zinc porphyrins [J].
Jarzecki, AA ;
Kozlowski, PM ;
Pulay, P ;
Ye, BH ;
Li, XY .
SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 1997, 53 (08) :1195-1209
[13]   ABSENCE OF HEME-LOCALIZED STRAIN IN T-STATE HEMOGLOBIN - INSENSITIVITY OF HEME-IMIDAZOLE RESONANCE RAMAN FREQUENCIES TO QUATERNARY STRUCTURE [J].
KINCAID, J ;
STEIN, P ;
SPIRO, TG .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1979, 76 (02) :549-552
[14]  
KINCAID J, 1979, P NATL ACAD SCI USA, V76, P4156
[15]   ASSIGNMENT OF THE FE-NEPSILON (HIS F8) STRETCHING BAND IN THE RESONANCE RAMAN-SPECTRA OF DEOXY MYOGLOBIN [J].
KITAGAWA, T ;
NAGAI, K ;
TSUBAKI, M .
FEBS LETTERS, 1979, 104 (02) :376-378
[16]   Low-lying spin states of iron(II) porphine [J].
Kozlowski, PM ;
Spiro, TG ;
Bérces, A ;
Zgierski, MZ .
JOURNAL OF PHYSICAL CHEMISTRY B, 1998, 102 (14) :2603-2608
[17]   Vibrational assignment and definite harmonic force field for porphine .1. Scaled quantum mechanical results and comparison with empirical force field [J].
Kozlowski, PM ;
Jarzecki, AA ;
Pulay, P .
JOURNAL OF PHYSICAL CHEMISTRY, 1996, 100 (17) :7007-7013
[18]   Vibrational assignment and definite harmonic force field for porphine .2. Comparison with nonresonance Raman data [J].
Kozlowski, PM ;
Jarzecki, AA ;
Pulay, P ;
Li, XY ;
Zgierski, MZ .
JOURNAL OF PHYSICAL CHEMISTRY, 1996, 100 (33) :13985-13992
[19]   DFT-SQM force field for nickel porphine: Intrinsic ruffling [J].
Kozlowski, PM ;
Rush, TS ;
Jarzecki, AA ;
Zgierski, MZ ;
Chase, B ;
Piffat, C ;
Ye, BH ;
Li, XY ;
Pulay, P ;
Spiro, TG .
JOURNAL OF PHYSICAL CHEMISTRY A, 1999, 103 (10) :1357-1366
[20]   An accurate in-plane force field for porphine. A scaled quantum mechanical study [J].
Kozlowski, PM ;
Zgierski, MZ ;
Pulay, P .
CHEMICAL PHYSICS LETTERS, 1995, 247 (4-6) :379-385