ALASKA:: A Mathematica package for two-state kinetic analysis of protein folding reactions

被引:14
作者
Burton, RE [1 ]
Busby, RS [1 ]
Oas, TG [1 ]
机构
[1] Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
关键词
dynamic NMR; kinetics; line shape simulation; protein folding;
D O I
10.1023/A:1008276703114
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A Mathematica package (ALASKA) has been developed to simplify the measurement of protein folding kinetics by analysis of H-1 NMR lineshape analysis. This package reads NMR data in ASCII format and can simulate an aromatic (NMR)-N-1 spectrum with or without lineshape broadening from chemical exchange. We describe the analysis of a urea denaturation series of a fast-folding protein, the G46A/G48A variant of monomeric lambda repressor.
引用
收藏
页码:355 / 359
页数:5
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