Database resources of the National Center for Biotechnology Information

被引：294

作者：

Wheeler, DL ^{[1
]}

Barrett, T ^{[1
]}

Benson, DA ^{[1
]}

Bryant, SH ^{[1
]}

Canese, K ^{[1
]}

Church, DM ^{[1
]}

Di Cuccio, M ^{[1
]}

Edgar, R ^{[1
]}

Federhen, S ^{[1
]}

Helmberg, W ^{[1
]}

Kenton, DL ^{[1
]}

Khovayko, O ^{[1
]}

Lipman, DJ ^{[1
]}

Madden, TL ^{[1
]}

Maglott, DR ^{[1
]}

Ostell, J ^{[1
]}

Pontius, JU ^{[1
]}

Pruitt, KD ^{[1
]}

Schuler, GD ^{[1
]}

Schriml, LM ^{[1
]}

Sequeira, E ^{[1
]}

Sherry, ST ^{[1
]}

Sirotkin, K ^{[1
]}

Starchenko, G ^{[1
]}

Suzek, TO ^{[1
]}

Tatusov, R ^{[1
]}

Tatusova, TA ^{[1
]}

Wagner, L ^{[1
]}

Yaschenko, E ^{[1
]}

机构：

[1] Natl Lib Med, Natl Ctr Biotechnol Informat, NIH, Bethesda, MD 20894 USA

来源：

NUCLEIC ACIDS RESEARCH | 2005年 / 33卷

基金：

美国国家科学基金会; 美国国家卫生研究院;

关键词：

D O I：

10.1093/nar/gki062

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

In addition to maintaining the GenBank(R) nucleic acid sequence database, the National Center for Biotechnology Information (NCBI) provides data retrieval systems and computational resources for the analysis of data in GenBank and other biological data made available through NCBI's website. NCBI resources include Entrez, Entrez Programming Utilities, PubMed, PubMed Central, Entrez Gene, the NCBI Taxonomy Browser, BLAST, BLAST Link (BLink), Electronic PCR, OrfFinder, Spidey, RefSeq, UniGene, HomoloGene, ProtEST, dbMHC, dbSNP, Cancer Chromosomes, Entrez Genomes and related tools, the Map Viewer, Model Maker, Evidence Viewer, Clusters of Orthologous Groups (COGs), Retroviral Genotyping Tools, HIV-1/Human Protein Interaction Database, SAGEmap, Gene Expression Omnibus (GEO), Online Mendelian Inheritance in Man (OMIM), the Molecular Modeling Database (MMDB), the Conserved Domain Database (CDD) and the Conserved Domain Architecture Retrieval Tool (CDART). Augmenting many of the Web applications are custom implementations of the BLAST program optimized to search specialized datasets. All of the resources can be accessed through the NCBI home page at http://www.ncbi.nim.nih.gov.

引用

页码：D39 / D45

页数：7

共 28 条

[1] Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].

Altschul, SF ;

Madden, TL ;

Schaffer, AA ;

Zhang, JH ;

Zhang, Z ;

Miller, W ;

Lipman, DJ .

NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402

[2] BASIC LOCAL ALIGNMENT SEARCH TOOL [J].

ALTSCHUL, SF ;

GISH, W ;

MILLER, W ;

MYERS, EW ;

LIPMAN, DJ .

JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410

[3]

[Anonymous], ARL

[4]

Barrett T, 2005, NUCLEIC ACIDS RES, V33, pD562

[5]

Bateman A, 2004, NUCLEIC ACIDS RES, V32, pD138, DOI [10.1093/nar/gkp985, 10.1093/nar/gkr1065, 10.1093/nar/gkh121]

[6]

Benson Dennis A, 2005, Nucleic Acids Res, V33, pD34

[7] The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003 [J].

Boeckmann, B ;

Bairoch, A ;

Apweiler, R ;

Blatter, MC ;

Estreicher, A ;

Gasteiger, E ;

Martin, MJ ;

Michoud, K ;

O'Donovan, C ;

Phan, I ;

Pilbout, S ;

Schneider, M .

NUCLEIC ACIDS RESEARCH, 2003, 31 (01) :365-370

[8] The distribution and query systems of the RCSB protein data bank [J].

Bourne, PE ;

Addess, KJ ;

Bluhm, WF ;

Chen, L ;

Deshpande, N ;

Feng, ZK ;

Fleri, W ;

Green, R ;

Merino-Ott, JC ;

Townsend-Merino, W ;

Weissig, H ;

Westbrook, J ;

Berman, HM .

NUCLEIC ACIDS RESEARCH, 2004, 32 :D223-D225

[9] Data management and analysis for gene expression arrays [J].

Ermolaeva, O ;

Rastogi, M ;

Pruitt, KD ;

Schuler, GD ;

Bittner, ML ;

Chen, YD ;

Simon, R ;

Meltzer, P ;

Trent, JM ;

Boguski, MS .

NATURE GENETICS, 1998, 20 (01) :19-23

[10] SAGEmap: A public gene expression resource [J].

Lash, AE ;

Tolstoshev, CM ;

Wagner, L ;

Schuler, GD ;

Strausberg, RL ;

Riggins, GJ ;

Altschul, SF .

GENOME RESEARCH, 2000, 10 (07) :1051-1060

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