LungMAP: The Molecular Atlas of Lung Development Program

被引:142
作者
Ardini-Poleske, Maryanne E. [1 ]
Clark, Robert F. [1 ]
Ansong, Charles [2 ]
Carson, James P. [3 ]
Corley, Richard A. [2 ]
Deutsch, Gail H. [4 ]
Hagood, James S. [5 ]
Kaminski, Naftali [6 ]
Mariani, Thomas J. [7 ]
Potter, Steven S. [8 ]
Pryhuber, Gloria S. [7 ]
Warburton, David [9 ]
Whitsett, Jeffrey A. [8 ]
Palmer, Scott M. [10 ]
Ambalavanan, Namasivayam [11 ]
机构
[1] RTI Int, 3040 East Cornwallis Rd, Res Triangle Pk, NC 27709 USA
[2] Pacific Northwest Natl Lab, Richland, WA USA
[3] Texas Adv Comp Ctr, Austin, TX USA
[4] Univ Washington, Seattle, WA 98195 USA
[5] Univ Calif San Diego, San Diego, CA 92103 USA
[6] Yale Sch Med, New Haven, CT USA
[7] Univ Rochester, Med Ctr, Rochester, NY 14642 USA
[8] Cincinnati Childrens Hosp, Med Ctr, Cincinnati, OH USA
[9] Childrens Hosp Los Angeles, Los Angeles, CA 90027 USA
[10] Duke Univ, Sch Med, Durham, NC USA
[11] Univ Alabama Birmingham, Birmingham, AL USA
关键词
lung development; web resource; lung imaging; lung omics; 3D imaging; single cell analysis; IONIZATION MASS-SPECTROMETRY; GENE-EXPRESSION; MORPHOGENESIS; WEB; ERA;
D O I
10.1152/ajplung.00139.2017
中图分类号
Q4 [生理学];
学科分类号
071003 [生理学];
摘要
The National Heart, Lung, and Blood Institute is funding an effort to create a molecular atlas of the developing lung (LungMAP) to serve as a research resource and public education tool. The lung is a complex organ with lengthy development time driven by interactive gene networks and dynamic cross talk among multiple cell types to control and coordinate lineage specification, cell proliferation, differentiation, migration, morphogenesis, and injury repair. A better understanding of the processes that regulate lung development, particularly alveologenesis, will have a significant impact on survival rates for premature infants born with incomplete lung development and will facilitate lung injury repair and regeneration in adults. A consortium of four research centers, a data coordinating center, and a human tissue repository provides high-quality molecular data of developing human and mouse lungs. LungMAP includes mouse and human data for cross correlation of developmental processes across species. LungMAP is generating foundational data and analysis, creating a web portal for presentation of results and public sharing of data sets, establishing a repository of young human lung tissues obtained through organ donor organizations, and developing a comprehensive lung ontology that incorporates the latest findings of the consortium. The LungMAP website (www.lungmap.net) currently contains more than 6,000 high-resolution lung images and transcriptomic, proteomic, and lipidomic human and mouse data and provides scientific information to stimulate interest in research careers for young audiences. This paper presents a brief description of research conducted by the consortium, database, and portal development and upcoming features that will enhance the LungMAP experience for a community of users.
引用
收藏
页码:L733 / L740
页数:8
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