Mutational dynamics of short tandem repeats in human genome

被引:7
作者
Borstnik, B [1 ]
Pumpernik, D [1 ]
机构
[1] Natl Inst Chem, Ljubljana 1001, Slovenia
来源
EUROPHYSICS LETTERS | 2004年 / 65卷 / 02期
关键词
D O I
10.1209/epl/i2003-10082-6
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
The evolutionary dynamics of short tandem repeats of nucleotide sequences of the human genome is studied. It is shown that a model due to which the evolutionary repeat dynamics consists of elongations and shortenings of the repeats, combined with point mutations, is degenerate in the sense that an ambiguity exists regarding the role of point mutations and slippage asymmetry. By introducing a measure of the correlations between the positions of the repeats along the DNA sequences we were able to remove the degeneracy and to show that the slippage events which are the main factor in repeat evolution exhibit more frequent shortenings than elongations.
引用
收藏
页码:290 / 296
页数:7
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