Structure of viscotoxin A3:: disulfide location from weak SAD data

被引:41
作者
Debreczeni, JÉ
Girmann, B
Zeeck, A
Krätzner, R
Sheldrick, GM
机构
[1] Univ Gottingen, Lehrstuhl Strukturchem, D-3400 Gottingen, Germany
[2] Univ Gottingen, Inst Organ Chem, Abt Biomol Chem, D-3400 Gottingen, Germany
来源
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY | 2003年 / 59卷
关键词
D O I
10.1107/S0907444903018973
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The crystal structure of viscotoxin A3 (VT A3) extracted from European mistletoe ( Viscum album L.) has been solved using the anomalous diffraction of the native S atoms measured in-house with Cu Kalpha radiation to a resolution of 2.2 Angstrom and truncated to 2.5 Angstrom. A 1.75 Angstrom resolution synchrotron data set was used for phase expansion and refinement. An innovation in the dual-space substructure-solution program SHELXD enabled the individual S atoms of the disulfide bonds to be located using the Cu Kalpha data; this resulted in a marked improvement in the phasing compared with the use of super-S atoms. The VT A3 monomer consists of 46 amino acids with three disulfide bridges and has an overall fold resembling the canonical architecture of the alpha- and beta-thionins, a capital letter L. The asymmetric unit consists of two monomers related by a local twofold axis and held together by hydrophobic interactions between the monomer units. One phosphate anion (confirmed by P-31-NMR and MS) is associated with each monomer.
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收藏
页码:2125 / 2132
页数:8
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