The first agmatine/cadaverine aminopropyl transferase:: Biochemical and structural characterization of an enzyme involved in polyamine biosynthesis in the hyperthermophilic archaeon Pyrococcus furiosus

被引:27
作者
Cacciapuoti, Giovanna
Porcelli, Marina
Moretti, Maria Angela
Sorrentino, Francesca
Concilio, Luigi
Zappia, Vincenzo
Liu, Zhi-Jie
Tempel, Wolfram
Schubot, Florian
Rose, John P.
Wang, Bi-Cheng
Brereton, Phillip S.
Jenney, Francis E.
Adams, Michael W. W.
机构
[1] Univ Naples 2, Dipartimento Biochim & Biofis, I-80138 Naples, Italy
[2] Univ Georgia, Dept Biochem & Mol Biol, Athens, GA 30602 USA
[3] Chinese Acad Sci, Inst Biophys, Natl Lab Biomacromol, Beijing 100101, Peoples R China
关键词
D O I
10.1128/JB.00151-07
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
We report here the characterization of the first agmatine/cadaverine aminopropyl transferase (ACAPT), the enzyme responsible for polyamine biosynthesis from an archaeon. The gene PF0127 encoding ACAPT in the hyperthermophile Pyrococcus furiosus was cloned and expressed in Escherichia coli, and the recombinant protein was purified to homogeneity. P. furiosus ACAPT is a homodimer of 65 kDa. The broad substrate specificity of the enzyme toward the amine acceptors is unique, as agmatine, 1,3-diaminopropane, putrescine, cadaverine, and sym-nor-spermidine all serve as substrates. While maximal catalytic activity was observed with cadaverine, agmatine was the preferred substrate on the basis of the k(cat)/K-m value. P. furiosus ACAPT is thermoactive and thermostable with an apparent melting temperature of 108 degrees C that increases to 112 degrees C in the presence of cadaverine. Limited proteolysis indicated that the only proteolytic cleavage site is localized in the C-terminal region and that the C-terminal peptide is not necessary for the integrity of the active site. The crystal structure of the enzyme determined to 1.8-angstrom resolution confirmed its dimeric nature and provided insight into the proteolytic analyses as well as into mechanisms of thermal stability. Analysis of the polyamine content of P. furiosus showed that spermidine, cadaverine, and sym-nor-spermidine are the major components, with small amounts of sym-nor-spermine and N-(3-aminopropyl)cadaverine (APC). This is the first report in Archaea of an unusual polyamine APC that is proposed to play a role in stress adaptation.
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页码:6057 / 6067
页数:11
相关论文
共 60 条
[1]  
Arendall W. Bryan III, 2005, Journal of Structural and Functional Genomics, V6, P1, DOI 10.1007/s10969-005-3138-4
[2]   The Protein Data Bank [J].
Berman, HM ;
Westbrook, J ;
Feng, Z ;
Gilliland, G ;
Bhat, TN ;
Weissig, H ;
Shindyalov, IN ;
Bourne, PE .
NUCLEIC ACIDS RESEARCH, 2000, 28 (01) :235-242
[3]   CASTp: Computed atlas of surface topography of proteins [J].
Binkowski, TA ;
Naghibzadeh, S ;
Liang, J .
NUCLEIC ACIDS RESEARCH, 2003, 31 (13) :3352-3355
[4]  
BOWMAN WH, 1973, J BIOL CHEM, V248, P2480
[5]  
BRADFORD MM, 1976, ANAL BIOCHEM, V72, P248, DOI 10.1016/0003-2697(76)90527-3
[6]   PURIFICATION AND CHARACTERIZATION OF PROPYLAMINE TRANSFERASE FROM SULFOLOBUS-SOLFATARICUS, AN EXTREME THERMOPHILIC ARCHAEBACTERIUM [J].
CACCIAPUOTI, G ;
PORCELLI, M ;
CARTENIFARINA, M ;
GAMBACORTA, A ;
ZAPPIA, V .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1986, 161 (02) :263-271
[7]  
CACCIAPUOTI G, 1994, J BIOL CHEM, V269, P24762
[8]  
CACCIAPUOTI G, 1989, PHYSL POLYAMINES, V2, P47
[9]   AN AUTOMATED-SYSTEM FOR MICROBATCH PROTEIN CRYSTALLIZATION AND SCREENING [J].
CHAYEN, NE ;
STEWART, PDS ;
MAEDER, DL ;
BLOW, DM .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1990, 23 :297-302
[10]   MolProbity: structure validation and all-atom contact analysis for nucleic acids and their complexes [J].
Davis, IW ;
Murray, LW ;
Richardson, JS ;
Richardson, DC .
NUCLEIC ACIDS RESEARCH, 2004, 32 :W615-W619