Selecton: a server for detecting evolutionary forces at a single amino-acid site

被引:118
作者
Doron-Faigenboim, A [1 ]
Stern, A [1 ]
Bacharach, E [1 ]
Pupko, T [1 ]
机构
[1] Tel Aviv Univ, George S Wise Fac Life Sci, Dept Cell Res & Immunol, IL-69978 Ramat Aviv, Israel
基金
以色列科学基金会;
关键词
D O I
10.1093/bioinformatics/bti259
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We present an algorithmic tool for the identification of biologically significant amino acids in proteins of known three dimensional structure. We estimate the degree of purifying selection and positive Darwinian selection at each site and project these estimates onto the molecular surface of the protein. Thus, patches of functional residues (undergoing either positive or purifying selection), which may be discontinuous in the linear sequence, are revealed. We test for the statistical significance of the site-specific scores in order to obtain reliable and valid estimates.
引用
收藏
页码:2101 / 2103
页数:3
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