Design and evaluation of specific PCR primers for rapid and reliable identification of Staphylococcus xylosus strains isolated from dry fermented sausages

被引:20
作者
Blaiotta, G
Pennacchia, C
Parente, E
Villani, F [1 ]
机构
[1] Univ Naples Federico II, Stn Microbiol Ind, Dipartimento Sci Alimenti, Sez Microbiol Agraria Alimentare Ambientale & Igi, Portici, Italy
[2] Univ Basilicata, Dipartimento Biol, I-85100 Potenza, Italy
关键词
Staphylococcus xylosus; PCR; species-specific PCR primers; xy/B gene; hsp60; gene;
D O I
10.1078/072320203770865918
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Rapid and reliable identification of Staphylococcus xylosus was achieved by species-specific PCR assays. Two sets of primers, targeting on xylulokinase (xylB) and 60 kDa heat-shock protein (hsp60) genes of S. xylosus, respectively, were designed. Species-specificity of both sets of primers was evaluated by using 27 reference strains of the DSM collection, representing 23 different species of the Staphylococcus genus and 3 species of the Kocuria genus. Moreover, 90 wild strains isolated from different fermented dry sausages were included in the analysis. By using primers xylB-F and xylB-R the expected PCR fragment was obtained only when DNA from S. xylosus was used. By contrast, amplification performed by using primers xylHs-F and xylHs-R produced a single PCR fragment, of the expected length, when DNA from S. xylosus, S. haemolyticus, S. intermedius and S. kloosii were used as template. Nevertheless, AM digestion of the xylHs-F/xylHs-R PCR fragment allowed a clear differentiation of these 4 species. The rapidity (about 4 h from DNA isolation to results) and reliability of the PCR procedures established suggests that the method may be profitably applied for specific detection and identification of S. xylosus strains.
引用
收藏
页码:601 / 610
页数:10
相关论文
共 63 条
[1]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[2]  
BERRIERE C, 1998, 44 INT C MEAT SCI TE, P794
[3]  
Bersani C., 1991, Industrie Alimentari, V30, P12
[4]   Improvement of the identification of staphylococci isolated from bovine mammary infections using molecular methods [J].
Bes, M ;
Guérin-Faublée, V ;
Meugnier, H ;
Etienne, J ;
Freney, J .
VETERINARY MICROBIOLOGY, 2000, 71 (3-4) :287-294
[5]   Combining denaturing gradient gel electrophoresis of 16S rDNA V3 region and 16S-23S rDNA spacer region polymorphism analyses for the identification of staphylococci from Italian fermented sausages [J].
Blaiotta, G ;
Pennacchia, C ;
Ercolini, D ;
Moschetti, G ;
Villani, F .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 2003, 26 (03) :423-433
[6]   16S-23S rDNA intergenic spacer region polymorphism of Lactococcus garvieae, Lactococcus raffinolactis and Lactococcus lactis as revealed by PCR and nucleotide sequence analysis [J].
Blaiotta, G ;
Pepe, O ;
Mauriello, G ;
Villani, F ;
Andolfi, R ;
Moschetti, G .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 2002, 25 (04) :520-527
[7]   Denaturing gradient gel electrophoresis analysis of the 16S rRNA gene V1 region to monitor dynamic changes in the bacterial population during fermentation of Italian sausages [J].
Cocolin, L ;
Manzano, M ;
Cantoni, C ;
Comi, G .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2001, 67 (11) :5113-5121
[8]   A novel polymerase chain reaction (PCR) -: denaturing gradient gel electrophoresis (DGGE) for the identification of Micrococcaceae strains involved in meat fermentations.: Its application to naturally fermented Italian sausages [J].
Cocolin, L ;
Manzano, M ;
Aggio, D ;
Cantoni, C ;
Comi, G .
MEAT SCIENCE, 2001, 58 (01) :59-64
[9]  
Comi G., 2000, ING ALIM, V4, P9
[10]   Characterization of micrococci and staphylococci isolated from soppressata molisana, a Southern Italy fermented sausage [J].
Coppola, R ;
Iorizzo, M ;
Saotta, R ;
Sorrentino, E ;
Grazia, L .
FOOD MICROBIOLOGY, 1997, 14 (01) :47-53