Recent advances in DNA catalysis

被引:53
作者
Hoebartner, Claudia [1 ]
Silverman, Scott K. [1 ]
机构
[1] Univ Illinois, Dept Chem, Urbana, IL 61801 USA
关键词
deoxyribozyme; DNA enzyme; DNAzyme; cleavage; ligation;
D O I
10.1002/bip.20813
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Studies of catalytically active DNA sequences have expanded considerably since the first artificial deoxyribozyme was identified in 1994. Nevertheless, the field is still quite young, and advances in both fundamental understanding and practical applications of deoxyribozymes are still developing. Deoxyribozymes that either cleave or ligate two RNA substrates have been most widely investigated, and this review describes recent advances in the fundamental studies and applications of these DNA enzymes. Deoxyribozymes with catalytic activities other than RNA ligation and cleavage are also increasingly pursued, and this review covers several key examples. (C) 2007 Wiley Periodicals, Inc.
引用
收藏
页码:279 / 292
页数:14
相关论文
共 63 条
[31]  
Lu Y, 2002, CHEM-EUR J, V8, P4589
[32]   Photochemical DNA activation [J].
Lusic, Hrvoje ;
Young, Douglas D. ;
Lively, Mark O. ;
Deiters, Alexander .
ORGANIC LETTERS, 2007, 9 (10) :1903-1906
[33]   Multiple occurrences of an efficient self-phosphorylating deoxyribozyme motif [J].
McManus, Simon A. ;
Li, Yingfu .
BIOCHEMISTRY, 2007, 46 (08) :2198-2204
[34]   Mapping of the functional phosphate groups in the catalytic core of deoxyribozyme 10-23 [J].
Nawrot, Barbara ;
Widera, Kinga ;
Wojcik, Marzena ;
Rebowska, Beata ;
Nowak, Genowefa ;
Stec, Wojciech J. .
FEBS JOURNAL, 2007, 274 (04) :1062-1072
[35]  
Nowakowski J, 1999, NAT STRUCT BIOL, V6, P151
[36]  
Paul N, 2006, CHEM BIOL, V13, P329, DOI 10.1016/j.chembiol.2006.01.007
[37]   Amplified chemiluminescence surface detection of DNA and telomerase activity using catalytic nucleic acid labels [J].
Pavlov, V ;
Xiao, Y ;
Gill, R ;
Dishon, A ;
Kotler, M ;
Willner, I .
ANALYTICAL CHEMISTRY, 2004, 76 (07) :2152-2156
[38]   A deoxyribozyme that synthesizes 2′5′-branched RNA with any branch-site nucleotide [J].
Pratico, ED ;
Wang, YM ;
Silverman, SK .
NUCLEIC ACIDS RESEARCH, 2005, 33 (11) :3503-3512
[39]   Ty1 reverse transcriptase does not read through the proposed 2',5'-branched retrotransposition intermediate in vitro [J].
Pratico, Elizabeth D. ;
Silverman, Scott K. .
RNA, 2007, 13 (09) :1528-1536
[40]   General deoxyribozyme-catalyzed synthesis of native 3′-5′ RNA linkages [J].
Purtha, WE ;
Coppins, RL ;
Smalley, MK ;
Silverman, SK .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2005, 127 (38) :13124-13125