From nucleosome to chromosome: a dynamic organization of genetic information

被引:71
作者
Fransz, Paul [1 ]
de Jong, Hans [2 ]
机构
[1] Univ Amsterdam, Swammerdam Inst Life Sci, Nucl Org Grp, NL-1098 XH Amsterdam, Netherlands
[2] Wageningen Univ & Res Ctr, Genet Lab, Wageningen, Netherlands
关键词
chromosome; chromatine structure; nucleosome positioning; nucleus; heterochromatin; HISTONE VARIANT H2A.Z; 30-NM CHROMATIN FIBER; ARABIDOPSIS-THALIANA; DNA METHYLATION; INTERPHASE CHROMOSOMES; IN-VIVO; NUCLEAR ARCHITECTURE; INSITU HYBRIDIZATION; REGULATORY REGIONS; H4-K16; ACETYLATION;
D O I
10.1111/j.1365-313X.2011.04526.x
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
P>Gene activity is controlled at different levels of chromatin organization, which involve genomic sequences, nucleosome structure, chromatin folding and chromosome arrangement. These levels are interconnected and influence each other. At the basic level nucleosomes generally occlude the DNA sequence from interacting with DNA-binding proteins. Evidently, nucleosome positioning is a major factor in gene control and chromatin organization. Understanding the biological rules that govern the deposition and removal of the nucleosomes to and from the chromatin fiber is the key to understanding gene regulation and chromatin organization. In this review we describe and discuss the relationship between the different levels of chromatin organization in plants and animals.
引用
收藏
页码:4 / 17
页数:14
相关论文
共 146 条
[1]  
AMBROS P, 1976, Arabidopsis Information Service, V13, P167
[2]   Effects of histone acetylation on the equilibrium accessibility of nucleosomal DNA target sites [J].
Anderson, JD ;
Lowary, PT ;
Widom, J .
JOURNAL OF MOLECULAR BIOLOGY, 2001, 307 (04) :977-985
[3]   Nucleosomes are well positioned in exons and carry characteristic histone modifications [J].
Andersson, Robin ;
Enroth, Stefan ;
Rada-Iglesias, Alvaro ;
Wadelius, Claes ;
Komorowski, Jan .
GENOME RESEARCH, 2009, 19 (10) :1732-1741
[4]  
[Anonymous], 1909, Arch Zellforsch
[5]   Association of homologous chromosomes during floral development [J].
AragonAlcaide, L ;
Reader, S ;
Beven, A ;
Shaw, P ;
Miller, T ;
Moore, G .
CURRENT BIOLOGY, 1997, 7 (11) :905-908
[6]   Role of histone tails in chromatin folding revealed by a mesoscopic oligonucleosome model [J].
Arya, Gaurav ;
Schlick, Tamar .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (44) :16236-16241
[7]   A Tale of Tails: How Histone Tails Mediate Chromatin Compaction in Different Salt and Linker Histone Environments [J].
Arya, Gaurav ;
Schlick, Tamar .
JOURNAL OF PHYSICAL CHEMISTRY A, 2009, 113 (16) :4045-4059
[8]   THE DIAMETERS OF FROZEN-HYDRATED CHROMATIN FIBERS INCREASE WITH DNA LINKER LENGTH - EVIDENCE IN SUPPORT OF VARIABLE DIAMETER MODELS FOR CHROMATIN [J].
ATHEY, BD ;
SMITH, MF ;
RANKERT, DA ;
WILLIAMS, SP ;
LANGMORE, JP .
JOURNAL OF CELL BIOLOGY, 1990, 111 (03) :795-806
[9]   RELATIONSHIP OF DISPERSION PHASE OF CHROMOCENTRIC NUCLEI IN MITOTIC-CYCLE TO DNA-SYNTHESIS [J].
BARLOW, PW .
PROTOPLASMA, 1976, 90 (3-4) :381-392
[10]   Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher-order folding and compaction of chromatin [J].
Bednar, J ;
Horowitz, RA ;
Grigoryev, SA ;
Carruthers, LM ;
Hansen, JC ;
Koster, AJ ;
Woodcock, CL .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (24) :14173-14178