Y-STR typing of an Austrian population sample using a 17-loci multiplex PCR assay

被引:50
作者
Berger, B [1 ]
Lindinger, A [1 ]
Niederstätter, H [1 ]
Grubwieser, P [1 ]
Parson, W [1 ]
机构
[1] Innsbruck Med Univ, Inst Legal Med, A-6020 Innsbruck, Austria
关键词
Y chromosome; short tandem repeats; Y-haplotypes; Y-SNP; haplogroups; population data; Austria;
D O I
10.1007/s00414-005-0546-8
中图分类号
DF [法律]; D9 [法律]; R [医药、卫生];
学科分类号
0301 ; 10 ;
摘要
Y-chromosomal STR haplotypes were determined from a sample of 135 unrelated men and 70 sons from Tirol (Austria) using the AmpFISTR Yfiler PCP, amplification kit (Applied Biosystems) that coamplifies 17 Y-STRs. The panel of markers includes the 9-loci European minimal haplotype (minHt) and, in addition, the markers DYS437, DYS438, DYS439, DYS448, DYS456, DYS458, DYS635 (Y GATA C4) and Y GATA H4. A total of 130 different haplotypes (125 were unique) were identified by the 17 Y-STR markers, an increase of 19 compared with the minHt. The gene diversity of DYS635, DYS456 and DYS458 exceeded 0.75 and only that of the duplicated marker DYS385 (0.86) was higher. Consistently high haplotype diversity values were found in all tested Y-SNP haplogroups. Because the simultaneous analysis of 17 Y-STR systems offers a high power of discrimination at minimum sample consumption, the Yfiler kit is a promising tool for forensic applications.
引用
收藏
页码:241 / 246
页数:6
相关论文
共 22 条
[1]   Extending STR markers in Y chromosome haplotypes [J].
Beleza, S ;
Alves, C ;
González-Neira, A ;
Lareu, M ;
Amorim, A ;
Carracedo, A ;
Gusmao, L .
INTERNATIONAL JOURNAL OF LEGAL MEDICINE, 2003, 117 (01) :27-33
[2]   Molecular characterization and Austrian Caucasian population data of the multi-copy Y-chromosomal STR DYS464 [J].
Berger, B ;
Niederstätter, H ;
Brandstätter, A ;
Parson, W .
FORENSIC SCIENCE INTERNATIONAL, 2003, 137 (2-3) :221-230
[3]   High resolution Y chromosome typing: 19 STRs amplified in three multiplex reactions [J].
Bosch, E ;
Lee, AC ;
Calafell, F ;
Arroyo, E ;
Henneman, P ;
de Knijff, P ;
Jobling, MA .
FORENSIC SCIENCE INTERNATIONAL, 2002, 125 (01) :42-51
[4]   Monitoring the inheritance of heteroplasmy by computer-assisted detection of mixed basecalls in the entire human mitochondrial DNA control region [J].
Brandstätter, A ;
Niederstätter, H ;
Parson, W .
INTERNATIONAL JOURNAL OF LEGAL MEDICINE, 2004, 118 (01) :47-54
[5]   A novel multiplex for simultaneous amplification of 20 Y chromosome STR markers [J].
Butler, JM ;
Schoske, R ;
Vallone, PM ;
Kline, MC ;
Redd, AJ ;
Hammer, MF .
FORENSIC SCIENCE INTERNATIONAL, 2002, 129 (01) :10-24
[6]  
Ellis N, 2002, GENOME RES, V12, P339
[7]   Forensic evaluation and population data on the new Y-STRs DYS434, DYS437, DYS438, DYS439 and GATA A10 [J].
Gusmao, L ;
Alves, C ;
Beleza, S ;
Amorim, A .
INTERNATIONAL JOURNAL OF LEGAL MEDICINE, 2002, 116 (03) :139-147
[8]   The human Y chromosome: An evolutionary marker comes of age [J].
Jobling, MA ;
Tyler-Smith, C .
NATURE REVIEWS GENETICS, 2003, 4 (08) :598-612
[9]   A comprehensive survey of human Y-chromosomal microsatellites [J].
Kayser, M ;
Kittler, R ;
Erler, A ;
Hedman, M ;
Lee, AC ;
Mohyuddin, A ;
Mehdi, SQ ;
Rosser, Z ;
Stoneking, M ;
Jobling, MA ;
Sajantila, A ;
Tyler-Smith, C .
AMERICAN JOURNAL OF HUMAN GENETICS, 2004, 74 (06) :1183-1197
[10]   Evaluation of Y-chromosomal STRs: A multicenter study [J].
Kayser, M ;
Caglia, A ;
Corach, D ;
Fretwell, N ;
Gehrig, C ;
Graziosi, G ;
Heidorn, F ;
Herrmann, S ;
Herzog, B ;
Hidding, M ;
Honda, K ;
Jobling, M ;
Krawczak, M ;
Leim, K ;
Meuser, S ;
Meyer, E ;
Oesterreich, W ;
Pandya, A ;
Parson, W ;
Penacino, G ;
PerezLezaun, A ;
Piccinini, A ;
Prinz, M ;
Schmitt, C ;
Schneider, PM ;
Szibor, R ;
TeifelGreding, J ;
Weichold, G ;
deKnijff, P ;
Roewer, L .
INTERNATIONAL JOURNAL OF LEGAL MEDICINE, 1997, 110 (03) :125-+