An upstream AG determines whether a downstream AG is selected during catalytic step II of splicing

被引:77
作者
Chua, K [1 ]
Reed, R [1 ]
机构
[1] Harvard Univ, Sch Med, Dept Cell Biol, Boston, MA 02115 USA
关键词
D O I
10.1128/MCB.21.5.1509-1514.2001
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Specific mechanisms must exist to ensure fidelity in selecting the AG dinucleotide that functions as the 3' splice site during the second transesterification step of splicing. Here we show that the optimal location for this AG is within a narrow distance (19 to 23 nucleotides [nt]) downstream from the branch point sequence (BPS). Contrary to previous expectations, AGs located less than 23 nt from the BPS are always recognized, even when a second AG located more optimally downstream is used in the transesterification reaction. Indeed, the AG closest to the BPS actually dictates the precise location of the AG that engages in the reaction. This mechanism, in which the AG is identified by a general localization step followed by a precise localization step, may be used to achieve fidelity while allowing flexibility in the location of 3' splice sites.
引用
收藏
页码:1509 / 1514
页数:6
相关论文
共 31 条
[11]  
FRANDSEN S, 1992, DELTA SCUTI STAR NEW, V5, P12
[12]   AN ESSENTIAL SPLICING FACTOR, SLU7, MEDIATES 3' SPLICE SITE CHOICE IN YEAST [J].
FRANK, D ;
GUTHRIE, C .
GENES & DEVELOPMENT, 1992, 6 (11) :2112-2124
[13]   A NOVEL SET OF SPLICEOSOME-ASSOCIATED PROTEINS AND THE ESSENTIAL SPLICING FACTOR PSF BIND STABLY TO PRE-MESSENGER-RNA PRIOR TO CATALYTIC STEP-II OF THE SPLICING REACTION [J].
GOZANI, O ;
PATTON, JG ;
REED, R .
EMBO JOURNAL, 1994, 13 (14) :3356-3367
[14]   IMPAIRMENT OF YEAST PRE-MESSENGER RNA SPLICING BY POTENTIAL SECONDARY STRUCTURE-FORMING SEQUENCES NEAR THE CONSERVED BRANCHPOINT SEQUENCE [J].
HALFTER, H ;
GALLWITZ, D .
NUCLEIC ACIDS RESEARCH, 1988, 16 (22) :10413-10423
[15]  
KRAINER AR, 1985, RA WELCH FDN C CHEM, V29, P353
[16]  
Liu ZR, 1997, RNA, V3, P1207
[17]   The role of branchpoint-3' splice site spacing and interaction between intron terminal nucleotides in 3' splice site selection in Saccharomyces cerevisiae [J].
Luukkonen, BGM ;
Seraphin, B .
EMBO JOURNAL, 1997, 16 (04) :779-792
[18]   Inhibition of msl-2 splicing by Sex-lethal reveals interaction between U2AF35 and the 3′ splice site AG [J].
Merendino, L ;
Guth, S ;
Bilbao, D ;
Martinez, C ;
Valcárcel, J .
NATURE, 1999, 402 (6763) :838-841
[19]  
MOORE MJ, 1993, RNA WORLD, P303
[20]   A U-RICH TRACT ENHANCES USAGE OF AN ALTERNATIVE 3' SPLICE SITE IN YEAST [J].
PATTERSON, B ;
GUTHRIE, C .
CELL, 1991, 64 (01) :181-187