Conformation analysis;
Drug delivery;
Druggability;
Molecular dynamics;
D O I:
10.1002/cmdc.200500013
中图分类号:
R914 [药物化学];
学科分类号:
100701 ;
摘要:
Drug targeting: The incorporation of protein binding-pocket fluctuations into the calculation of protein druggability improves the agreement between experimental data and predictions based on assessment of static protein structures alone. The predicted druggability of Bcl-xL benefits from the incorporation of multiple conformations taken from molecular dynamics simulation, which captures fluctuations in binding pocket shape and size (two such structures shown in A and B).
机构:
Univ Calif San Diego, Howard Hughes Med Inst, Dept Pharmacol, La Jolla, CA 92093 USAUniv Calif San Diego, Howard Hughes Med Inst, Dept Pharmacol, La Jolla, CA 92093 USA
Schames, JR
Henchman, RH
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Diego, Howard Hughes Med Inst, Dept Pharmacol, La Jolla, CA 92093 USA
Henchman, RH
Siegel, JS
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Diego, Howard Hughes Med Inst, Dept Pharmacol, La Jolla, CA 92093 USA
Siegel, JS
Sotriffer, CA
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Diego, Howard Hughes Med Inst, Dept Pharmacol, La Jolla, CA 92093 USA
Sotriffer, CA
Ni, HH
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Diego, Howard Hughes Med Inst, Dept Pharmacol, La Jolla, CA 92093 USA
Ni, HH
McCammon, JA
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Diego, Howard Hughes Med Inst, Dept Pharmacol, La Jolla, CA 92093 USA
机构:
Univ Calif San Diego, Howard Hughes Med Inst, Dept Pharmacol, La Jolla, CA 92093 USAUniv Calif San Diego, Howard Hughes Med Inst, Dept Pharmacol, La Jolla, CA 92093 USA
Schames, JR
Henchman, RH
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Diego, Howard Hughes Med Inst, Dept Pharmacol, La Jolla, CA 92093 USA
Henchman, RH
Siegel, JS
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Diego, Howard Hughes Med Inst, Dept Pharmacol, La Jolla, CA 92093 USA
Siegel, JS
Sotriffer, CA
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Diego, Howard Hughes Med Inst, Dept Pharmacol, La Jolla, CA 92093 USA
Sotriffer, CA
Ni, HH
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Diego, Howard Hughes Med Inst, Dept Pharmacol, La Jolla, CA 92093 USA
Ni, HH
McCammon, JA
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Diego, Howard Hughes Med Inst, Dept Pharmacol, La Jolla, CA 92093 USA