ASEdb: a database of alanine mutations and their effects on the free energy of binding in protein interactions

被引:312
作者
Thorn, KS [1 ]
Bogan, AA [1 ]
机构
[1] Univ Calif San Francisco, Grad Grp Biophys, San Francisco, CA 94143 USA
关键词
D O I
10.1093/bioinformatics/17.3.284
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The Alanine Scanning Energetics database (ASEdb) is a searchable database of single alanine mutations in protein-protein, protein-nucleic acid, and protein-small molecule interactions for which binding affinities have been experimentally determined. In cases where structures are available, it contains surface areas of the mutated side chain and links to the PDB entries. It is useful for studying the contribution of single amino acids to the energetics of protein interactions, and can be updated by researchers as new data are generated.
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页码:284 / 285
页数:2
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