How good are deep phylogenetic trees?

被引：243

作者：

Philippe, H ^{[1
]}

Laurent, J ^{[1
]}

机构：

[1] Univ Paris Sud, CNRS, URA 2227, Biol Cellulaire Lab, F-91405 Orsay, France

来源：

CURRENT OPINION IN GENETICS & DEVELOPMENT | 1998年 / 8卷 / 06期

关键词：

D O I：

10.1016/S0959-437X(98)80028-2

中图分类号：

Q2 [细胞生物学];

学科分类号：

071009 ; 090102 ;

摘要：

Great interest is given to species emerging early in phylogenetic reconstruction because they are often assumed to represent an ancestor. Recent studies indicate, however, that species branching deep in molecular trees are often fast-evolving ones, misplaced because of the long-branch artefact. The detection of genuinely deep-branching organisms remains an elusive task.

引用

页码：616 / 623

页数：8

共 68 条

[21] Signature sequences in diverse proteins provide evidence of a close evolutionary relationship between the Deinococcus-Thermus group and cyanobacteria [J].

Gupta, RS ;

Johari, V .

JOURNAL OF MOLECULAR EVOLUTION, 1998, 46 (06) :716-720

[22] Lagomorphs misplaced by more characters and fewer taxa [J].

Halanych, KM .

SYSTEMATIC BIOLOGY, 1998, 47 (01) :138-146

[23] Evolutionary distances for protein-coding sequences: Modeling site-specific residue frequencies [J].

Halpern, AL ;

Bruno, WJ .

MOLECULAR BIOLOGY AND EVOLUTION, 1998, 15 (07) :910-917

[24] Secondary absence of mitochondria in Giardia lamblia and Trichomonas vaginalis revealed by valyl-tRNA synthetase phylogeny [J].

Hashimoto, T ;

Sanchez, LB ;

Shirakura, T ;

Müller, M ;

Hasegawa, M .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (12) :6860-6865

[25] A FRAMEWORK FOR THE QUANTITATIVE STUDY OF EVOLUTIONARY TREES [J].

HENDY, MD ;

PENNY, D .

SYSTEMATIC ZOOLOGY, 1989, 38 (04) :297-309

[26] A mitochondrial Hsp70 orthologue in Vairimorpha necatrix: Molecular evidence that microsporidia once contained mitochondria [J].

Hirt, RP ;

Healy, B ;

Vossbrinck, CR ;

Canning, EU ;

Embley, TM .

CURRENT BIOLOGY, 1997, 7 (12) :995-998

[27] Is the Felsenstein zone a fly trap? [J].

Huelsenbeck, JP .

SYSTEMATIC BIOLOGY, 1997, 46 (01) :69-74

[28] Molecular phylogenetics at the Felsenstein zone: Approaching the Strepsiptera problem using 5.8S and 28S rDNA sequences [J].

Hwang, UW ;

Kim, W ;

Tautz, D ;

Friedrich, M .

MOLECULAR PHYLOGENETICS AND EVOLUTION, 1998, 9 (03) :470-480

[29] Protein phylogeny of translation elongation factor EF-1 alpha suggests microsporidians are extremely ancient eukaryotes [J].

Kamaishi, T ;

Hashimoto, T ;

Nakamura, Y ;

Nakamura, F ;

Murata, S ;

Okada, N ;

Okamoto, K ;

Shimizu, M ;

Hasegawa, M .

JOURNAL OF MOLECULAR EVOLUTION, 1996, 42 (02) :257-263

[30] General inconsistency conditions for maximum parsimony: Effects of branch lengths and increasing numbers of taxa [J].

Kim, JH .

SYSTEMATIC BIOLOGY, 1996, 45 (03) :363-374

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