The O-Glycosylated Linker from the Trichoderma reesei Family 7 Cellulase Is a Flexible, Disordered Protein

被引:104
作者
Beckham, Gregg T. [1 ,2 ,3 ]
Bomble, Yannick J. [4 ]
Matthews, James F. [4 ]
Taylor, Courtney B. [5 ,6 ]
Resch, Michael G. [4 ]
Yarbrough, John M. [4 ]
Decker, Steve R. [4 ]
Bu, Lintao [1 ]
Zhao, Xiongce [7 ]
McCabe, Clare [5 ,6 ]
Wohlert, Jakob [7 ,9 ]
Bergenstrahle, Malin [7 ,9 ]
Brady, John W. [8 ]
Adney, William S. [4 ]
Himmel, Michael E. [4 ]
Crowley, Michael F. [4 ]
机构
[1] Natl Renewable Energy Lab, Natl Bioenergy Ctr, Golden, CO USA
[2] Colorado Sch Mines, Dept Chem Engn, Golden, CO 80401 USA
[3] Univ Colorado, Renewable & Sustainable Energy Inst, Boulder, CO 80309 USA
[4] Natl Renewable Energy Lab, Biosci Ctr, Golden, CO USA
[5] Vanderbilt Univ, Dept Chem & Biomol Engn, Nashville, TN USA
[6] Vanderbilt Univ, Dept Chem, Nashville, TN USA
[7] Oak Ridge Natl Lab, Ctr Nanophase Mat Sci, Oak Ridge, TN USA
[8] Cornell Univ, Dept Food Sci, Ithaca, NY 14853 USA
[9] Royal Inst Technol, Wallenberg Wood Sci Ctr, Stockholm, Sweden
基金
美国国家科学基金会;
关键词
X-RAY-SCATTERING; MOLECULAR-DYNAMICS SIMULATIONS; CARBOHYDRATE-BINDING MODULE; CELLOBIOHYDROLASE-I; MICROCRYSTALLINE CELLULOSE; GENERALIZED BORN; INTRINSIC DISORDER; FUNCTIONAL DOMAINS; CRYSTAL-STRUCTURES; FUNGAL CELLULASE;
D O I
10.1016/j.bpj.2010.10.032
中图分类号
Q6 [生物物理学];
学科分类号
071011 [生物物理学];
摘要
Fungi and bacteria secrete glycoprotein cocktails to deconstruct cellulose Cellulose degrading enzymes (cellulases) are often modular with catalytic domains for cellulose hydrolysis and carbohydrate binding modules connected by linkers rich in serine and threonine with O-glycosylation Few studies have probed the role that the linker and O-glycans play in catalysis Since different expression and growth conditions produce different glycosylation patterns that affect enzyme activity the structure function relationships that glycosylation imparts to linkers are relevant for understanding cellulase mechanisms Here the linker of the Trichoderma reesei Family 7 cellobiohydrolase (Cel7A) is examined by simulation Our results suggest that the Cel7A linker is an intrinsically disordered protein with and without glycosylation Contrary to the predominant view the O-glycosylation does not change the stiffness of the linker as measured by the relative fluctuations in the end to end distance rather it provides a 16 A extension thus expanding the operating range of Cel7A We explain observations from previous biochemical experiments in the light of results obtained here and compare the Cel7A linker with linkers from other cellulases with sequence based tools to predict disorder This preliminary screen indicates that linkers from Family 7 enzymes from other genera and other cellulases within T reesei may not be as disordered warranting further study
引用
收藏
页码:3773 / 3781
页数:9
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