NMR spectroscopy tools for structure-aided drug design

被引:61
作者
Homans, SW [1 ]
机构
[1] Univ Leeds, Sch Biochem & Mol Biol, Leeds LS2 9JT, W Yorkshire, England
关键词
drug design; ligand-protein interactions; NMR spectroscopy; proteins; screening;
D O I
10.1002/anie.200300581
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Biomolecular NMR spectroscopy has expanded dramatically in recent years and is now a powerful tool for the study of structure, dynamics, and interactions of biomolecules. Previous limitations with respect to molecular size are no longer a primary barrier, and systems as large as 900 kDa were recently studied. NMR spectroscopy is already well-established as an efficient method for ligand screening. A number of recently developed techniques show promise as aids in structure-based drug design, for example, in the rapid determination of global protein folds, the structural characterization of ligand-protein complexes, and the derivation of thermodynamic parameters. An advantage of the method is that all these interactions can be studied in solution-time-consuming crystallization is not necessary. This Review focuses on recent developments in NMR spectroscopy and how they might be of value in removing some of the current bottle-necks" in structure-based drug discovery."
引用
收藏
页码:290 / 300
页数:11
相关论文
共 107 条
[51]   NMR relaxation order parameter analysis of the dynamics of protein side chains [J].
LeMaster, DM .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1999, 121 (08) :1726-1742
[52]   Insights into the local residual entropy of proteins provided by NMR relaxation [J].
Li, ZG ;
Raychaudhuri, S ;
Wand, AJ .
PROTEIN SCIENCE, 1996, 5 (12) :2647-2650
[53]   MODEL-FREE APPROACH TO THE INTERPRETATION OF NUCLEAR MAGNETIC-RESONANCE RELAXATION IN MACROMOLECULES .1. THEORY AND RANGE OF VALIDITY [J].
LIPARI, G ;
SZABO, A .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1982, 104 (17) :4546-4559
[54]   Order matrix analysis of residual dipolar couplings using singular value decomposition [J].
Losonczi, JA ;
Andrec, M ;
Fischer, MWF ;
Prestegard, JH .
JOURNAL OF MAGNETIC RESONANCE, 1999, 138 (02) :334-342
[55]   Improved dilute bicelle solutions for high-resolution NMR of biological macromolecules [J].
Losonczi, JA ;
Prestegard, JH .
JOURNAL OF BIOMOLECULAR NMR, 1998, 12 (03) :447-451
[56]   Structure of a glycoconjugate in solution and in complex with an antibody Fv fragment [J].
Low, DG ;
Probert, MA ;
Embleton, G ;
Seshadri, K ;
Field, RA ;
Homans, SW ;
Windust, J ;
Davis, PJ .
GLYCOBIOLOGY, 1997, 7 (03) :373-381
[57]   Some NMR experiments and a structure determination employing a {15N,2H} enriched protein [J].
Mal, TK ;
Matthews, SJ ;
Kovacs, H ;
Campbell, ID ;
Boyd, J .
JOURNAL OF BIOMOLECULAR NMR, 1998, 12 (02) :259-276
[58]  
Mayer M, 1999, ANGEW CHEM INT EDIT, V38, P1784, DOI 10.1002/(SICI)1521-3773(19990614)38:12<1784::AID-ANIE1784>3.0.CO
[59]  
2-Q
[60]   The use of differential chemical shifts for determining the binding site location and orientation of protein-bound ligands [J].
Medek, A ;
Hajduk, PJ ;
Mack, J ;
Fesik, SW .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2000, 122 (06) :1241-1242