Coding and noncoding genomic regions of Entamoeba histolytica have significantly different rates of sequence polymorphisms:: Implications for epidemiological studies

被引:23
作者
Bhattacharya, D
Haque, R
Singh, U
机构
[1] Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USA
[2] Stanford Univ, Sch Med, Dept Internal Med, Div Infect Dis, Stanford, CA 94305 USA
[3] Int Ctr Diarrhoeal Dis Res, Ctr Hlth & Populat Res, Dhaka 1000, Bangladesh
关键词
D O I
10.1128/JCM.43.9.4815-4819.2005
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
To evaluate genetic variability among Entamoeba histolytica strains, we sequenced 9,077 bp from each of 14 isolates. The polymorphism rates from coding and noncoding regions were significantly different (0.07% and 0.37%, respectively), indicating that these regions are subject to different selection pressures. Additionally, single nucleotide polymorphisms (SNPs) potentially associated with specific clinical outcomes were identified.
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页码:4815 / 4819
页数:5
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