Conformation of full-length Bruton tyrosine kinase (Btk) from synchrotron X-ray solution scattering

被引:60
作者
Márquez, JA
Smith, CIE
Petoukhov, MV
Lo Surdo, P
Mattsson, PT
Knekt, M
Westlund, A
Scheffzek, K
Saraste, M
Svergun, DI
机构
[1] European Mol Biol Lab, Grenoble Outstn, F-38042 Grenoble 9, France
[2] European Mol Biol Lab, D-69117 Heidelberg, Germany
[3] DESY, European Mol Biol Lab, Hamburg Outstn, D-22603 Hamburg, Germany
[4] Huddinge Univ Hosp, Novum, Clin Res Ctr, Karolinska Inst, SE-14186 Huddinge, Sweden
[5] KaroBio AB, SE-14157 Huddinge, Sweden
[6] Russian Acad Sci, Inst Crystallog, Moscow 117333, Russia
[7] Univ Turku, Dept Biochem & Food Chem, FIN-20014 Turku, Finland
关键词
ab initio models; protein tyrosine kinase; rigid body refinement; Tec kinases; XLA;
D O I
10.1093/emboj/cdg448
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Brutons's tyrosine kinase (Btk) is a non-receptor protein tyrosine kinase (nrPTK) essential for the development of B lymphocytes in humans and mice. Like Src and Abl PTKs, Btk contains a conserved cassette formed by SH3, SH2 and protein kinase domains, but differs from them by the presence of an N-terminal PH domain and the Tec homology region. The domain structure of Btk was analysed using X-ray synchrotron radiation scattering in solution. Low resolution shapes of the full-length protein and several deletion mutants determined ab initio from the scattering data indicated a linear arrangement of domains. This arrangement was further confirmed by rigid body modelling using known high resolution structures of individual domains. The final model of Btk displays an extended conformation with no, or little, inter-domain interactions. In agreement with these results, deletion of non-catalytic domains failed to enhance the activity of Btk. Taken together, our results indicate that, contrary to Src and Abl, Btk might not require an assembled conformation for the regulation of its activity.
引用
收藏
页码:4616 / 4624
页数:9
相关论文
共 61 条
[1]   PURIFICATION AND CHARACTERIZATION OF RECOMBINANT HUMAN P50(CSK) PROTEIN-TYROSINE KINASE FROM AN ESCHERICHIA-COLI EXPRESSION SYSTEM OVERPRODUCING THE BACTERIAL CHAPERONES GROES AND GROEL [J].
AMREIN, KE ;
TAKACS, B ;
STIEGER, M ;
MOLNOS, J ;
FLINT, NA ;
BURN, P .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1995, 92 (04) :1048-1052
[2]   Regulatory intramolecular association in a tyrosine kinase of the Tec family [J].
Andreotti, AH ;
Bunnell, SC ;
Feng, S ;
Berg, LJ ;
Schreiber, SL .
NATURE, 1997, 385 (6611) :93-97
[3]   Phosphorylation of Bruton's tyrosine kinase by c-Abl [J].
Bäckesjö, CM ;
Vargas, L ;
Superti-Furga, G ;
Smith, CIE .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2002, 299 (03) :510-515
[4]   Bruton's tyrosine kinase links the B cell receptor to nuclear factor κB activation [J].
Bajpai, UD ;
Zhang, KM ;
Teutsch, M ;
Sen, R ;
Wortis, HH .
JOURNAL OF EXPERIMENTAL MEDICINE, 2000, 191 (10) :1735-1744
[5]   Structure of the PH domain from Bruton's tyrosine kinase in complex with inositol 1,3,4,5-tetrakisphosphate [J].
Baraldi, E ;
Carugo, KD ;
Hyvönen, M ;
Lo Surdo, P ;
Riley, AM ;
Potter, BVL ;
O'Brien, R ;
Ladbury, JE ;
Saraste, M .
STRUCTURE, 1999, 7 (04) :449-460
[6]   DATA ACQUISITION-SYSTEMS FOR LINEAR AND AREA X-RAY-DETECTORS USING DELAY-LINE READOUT [J].
BOULIN, CJ ;
KEMPF, R ;
GABRIEL, A ;
KOCH, MHJ .
NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION A-ACCELERATORS SPECTROMETERS DETECTORS AND ASSOCIATED EQUIPMENT, 1988, 269 (01) :312-320
[7]   Antigen-dependent B-cell development [J].
Cariappa, A ;
Pillai, S .
CURRENT OPINION IN IMMUNOLOGY, 2002, 14 (02) :241-249
[8]   Calculation of hydrodynamic properties of globular proteins from their atomic-level structure [J].
de la Torre, JG ;
Huertas, ML ;
Carrasco, B .
BIOPHYSICAL JOURNAL, 2000, 78 (02) :719-730
[9]   HYDRO - A COMPUTER-PROGRAM FOR THE PREDICTION OF HYDRODYNAMIC PROPERTIES OF MACROMOLECULES [J].
DELATORRE, JG ;
NAVARRO, S ;
MARTINEZ, MCL ;
DIAZ, FG ;
CASCALES, JJL .
BIOPHYSICAL JOURNAL, 1994, 67 (02) :530-531
[10]  
Feigin L., 1987, STRUCTURE ANAL SMALL