4,4-dimethyl-4-silapentane-1-ammonium trifluoroacetate (DSA), a promising universal internal standard for NMR-based metabolic profiling studies of biofluids, including blood plasma and serum

被引:43
作者
Alum, Mohammed F. [1 ]
Shaw, Paul A. [1 ]
Sweatman, Brian C. [1 ]
Ubhi, Baljit K. [1 ]
Haselden, John N. [1 ]
Connor, Susan C. [1 ]
机构
[1] GlaxoSmithKline R&D, Safety Assessment Div, Dept Investigat Preclin Toxicol, Ware SG12 0DP, Herts, England
关键词
4,4-dimethyl-4-silapentane-1-ammonium trifluoroacetate (DSA); metabolomics; metabonomics; proton NMR; blood plasma/serum; internal reference standard;
D O I
10.1007/s11306-008-0103-9
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Nuclear magnetic resonance (NMR)-based metabolic profiling of biofluids and tissues are of key interest to enhance biomarker discovery for disease, drug efficacy and toxicity studies. Urine and blood plasma/serum are the biofluids of most interest as they are the most accessible in both clinical and preclinical studies. However, proteinaceous fluids, such as blood serum or plasma, represent the greatest technical challenge since the chemical shift (delta) and line-width (nu(1/2)) of internal standards currently used for aqueous NMR samples are greatly affected by protein binding. We have therefore investigated the suitability of 4,4-dimethyl-4-silapentane-1-ammonium trifluoroacetate (DSA) as a universal internal standard for biofluids. Proton (H-1) NMR spectroscopy was used to determine the effect of serum pH (3, 7.4 and 10) and DSA concentration on the overall lineshape and position of the trimethylsilyl resonance of DSA. The results were compared to that of 3-(trimethylsilyl)propionic acid sodium salt (TSP). Both the chemical shift and line-width of the DSA peak were not significantly affected by pH or DSA concentration, whereas these parameters for TSP showed large variations due to protein binding. Furthermore, the peak area of DSA correlated linearly with its concentration under all pH conditions, whilst no linear correlation was observed with TSP. Overall, in contrast to TSP, these results support the use of DSA as an accurate universal internal chemical shift reference and concentration/normalisation standard for biofluids. In the case of proteinaceous biofluids such as serum, where no current standard is available, this offers a considerable saving in both operator and spectrometer time.
引用
收藏
页码:122 / 127
页数:6
相关论文
共 20 条
[1]  
Bell J D, 1989, NMR Biomed, V2, P246, DOI 10.1002/nbm.1940020513
[2]   Lactic acid and protein interactions: implications for the NMR visibility of lactate in biological systems [J].
Chatham, JC ;
Forder, JR .
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, 1999, 1426 (01) :177-184
[3]   1H NMR-based metabonomics for the diagnosis of inborn errors of metabolism in urine [J].
Constantinou, MA ;
Papakonstantinou, E ;
Spraul, M ;
Sevastiadou, S ;
Costalos, C ;
Koupparis, MA ;
Shulpis, K ;
Tsantili-Kakoulidou, A ;
Mikros, E .
ANALYTICA CHIMICA ACTA, 2005, 542 (02) :169-177
[4]   The comparison of plasma deproteinization methods for the detection of low-molecular-weight metabolites by 1H nuclear magnetic resonance spectroscopy [J].
Daykin, CA ;
Foxall, PJD ;
Connor, SC ;
Lindon, JC ;
Nicholson, JK .
ANALYTICAL BIOCHEMISTRY, 2002, 304 (02) :220-230
[5]   PH-DEPENDENCE OF INTERNAL REFERENCES [J].
DEMARCO, A .
JOURNAL OF MAGNETIC RESONANCE, 1977, 26 (03) :527-528
[6]   INTERNAL TEMPERATURE CALIBRATION FOR H-1-NMR SPECTROSCOPY STUDIES OF BLOOD-PLASMA AND OTHER BIOFLUIDS [J].
FARRANT, RD ;
LINDON, JC ;
NICHOLSON, JK .
NMR IN BIOMEDICINE, 1994, 7 (05) :243-247
[7]  
Gartland K P, 1990, NMR Biomed, V3, P166, DOI 10.1002/nbm.1940030404
[8]   Analysis of the variations of follicular fluid composition during follicular growth and maturation in the mare using proton nuclear magnetic resonance (1H NMR) [J].
Gérard, N ;
Loiseau, S ;
Duchamp, G ;
Seguin, F .
REPRODUCTION, 2002, 124 (02) :241-248
[9]   Metabonomics: Its potential as a tool in toxicology for safety assessment and data integration [J].
Griffin, JL ;
Bollard, ME .
CURRENT DRUG METABOLISM, 2004, 5 (05) :389-398
[10]  
KRAIT M, 1992, NMR BIOMED, V5, P179