Elementary structural motifs in a random network of cytosine adsorbed on a gold(111) surface

被引:156
作者
Otero, Roberto [1 ,2 ]
Lukas, Maya [1 ,2 ]
Kelly, Ross E. A. [3 ]
Xu, Wei [1 ,2 ]
Laegsgaard, Erik [1 ,2 ]
Stensgaard, Ivan [1 ,2 ]
Kantorovich, Lev N. [3 ]
Besenbacher, Flemming [1 ,2 ]
机构
[1] Aarhus Univ, Ctr DNA Nanotechnol, Interdisciplinary Nanosci Ctr, DK-8000 Aarhus C, Denmark
[2] Aarhus Univ, Dept Phys & Astron, DK-8000 Aarhus C, Denmark
[3] Kings Coll London, Sch Phys Sci & Engn, Dept Phys, London WC2R 2LS, England
关键词
D O I
10.1126/science.1150532
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Nonsymmetrical organic molecules adsorbed on solid surfaces may assemble into random networks, thereby providing model systems for organic glasses that can be directly observed by scanning tunneling microscopy ( STM). We investigated the structure of a disordered cytosine network on a gold( 111) surface created by thermal quenching, to temperatures below 150 K, of the two- dimensional fluid present on the surface at room temperature. Comparison of STM images to density functional theory calculations allowed us to identify three elementary structural motifs ( zigzag filaments and five- and six- membered rings) that underlie the whole supramolecular random network. The identification of elementary structural motifs may provide a new framework for understanding medium- range order in amorphous and glassy systems.
引用
收藏
页码:312 / 315
页数:4
相关论文
共 16 条
[1]   Molecular architectonic on metal surfaces [J].
Barth, Johannes V. .
ANNUAL REVIEW OF PHYSICAL CHEMISTRY, 2007, 58 :375-407
[2]   Enantiomeric interactions between nucleic acid bases and amino acids on solid surfaces [J].
Chen, Q ;
Richardson, NV .
NATURE MATERIALS, 2003, 2 (05) :324-328
[3]   The role of dimer formation in the self-assemblies of DNA base molecules on Cu(111) surfaces: A scanning tunneling microscope study [J].
Furukawa, M ;
Tanaka, H ;
Kawai, T .
JOURNAL OF CHEMICAL PHYSICS, 2001, 115 (07) :3419-3423
[4]   Homopairing possibilities of the DNA bases cytosine and guanine: An ab initio DFT study [J].
Kelly, REA ;
Lee, YJ ;
Kantorovich, LN .
JOURNAL OF PHYSICAL CHEMISTRY B, 2005, 109 (46) :22045-22052
[5]   EVIDENCE OF VOIDS WITHIN AS-DEPOSITED STRUCTURE OF GLASSY SILICON [J].
MOSS, SC ;
GRACZYK, JF .
PHYSICAL REVIEW LETTERS, 1969, 23 (20) :1167-&
[6]   Guanine quartet networks stabilized by cooperative hydrogen bonds [J].
Otero, R ;
Schöck, M ;
Molina, LM ;
Lægsgaard, E ;
Stensgaard, I ;
Hammer, B ;
Besenbacher, F .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2005, 44 (15) :2270-2275
[7]   Scanningtunneling microscopy manipulation of complex organic molecules on solid surfaces [J].
Otero, Roberto ;
Rosei, Federico ;
Besenbacher, Flemming .
ANNUAL REVIEW OF PHYSICAL CHEMISTRY, 2006, 57 :497-525
[8]   Experimental and theoretical identification of adenine monolayers on Ag-terminated Si(111) [J].
Perdigao, Luis M. A. ;
Staniec, Paul A. ;
Champness, Neil R. ;
Kelly, R. E. A. ;
Kantorovich, L. N. ;
Beton, Peter H. .
PHYSICAL REVIEW B, 2006, 73 (19)
[9]   Quantitative assessment of the effects of orientational and positional disorder on glassy dynamics [J].
Ramos, MA ;
Vieira, S ;
Bermejo, FJ ;
Dawidowski, J ;
Fischer, HE ;
Schober, H ;
Gonzalez, MA ;
Loong, CK ;
Price, DL .
PHYSICAL REVIEW LETTERS, 1997, 78 (01) :82-85
[10]   Properties of large organic molecules on metal surfaces [J].
Rosei, F ;
Schunack, M ;
Naitoh, Y ;
Jiang, P ;
Gourdon, A ;
Laegsgaard, E ;
Stensgaard, I ;
Joachim, C ;
Besenbacher, F .
PROGRESS IN SURFACE SCIENCE, 2003, 71 (5-8) :95-146