Evolutionary Stochastic Search for Bayesian Model Exploration

被引:91
作者
Bottolo, Leonard [1 ,2 ]
Richardson, Sylvia [2 ]
机构
[1] Univ London Imperial Coll Sci Technol & Med, MRC Clin Sci Ctr, London, England
[2] Univ London Imperial Coll Sci Technol & Med, Ctr Biostat, London, England
来源
BAYESIAN ANALYSIS | 2010年 / 5卷 / 03期
关键词
Evolutionary Monte Carlo; Fast Scan Metropolis-Hastings scheme; linear Gaussian regression models; variable selection; VARIABLE SELECTION;
D O I
10.1214/10-BA523
中图分类号
O1 [数学];
学科分类号
0701 ; 070101 ;
摘要
Implementing Bayesian variable selection for linear Gaussian regression models for analysing high dimensional data sets is of current interest in many fields. In order to make such analysis operational, we propose a new sampling algorithm based upon Evolutionary Monte Carlo and designed to work under the "large p, small n" paradigm, thus making fully Bayesian multivariate analysis feasible, for example, in genetics/genomics experiments. Two real data examples in genomics are presented, demonstrating the performance of the algorithm in a space of up to 10, 000 covariates. Finally the methodology is compared with a recently proposed search algorithms in an extensive simulation study.
引用
收藏
页码:583 / 618
页数:36
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