The targeted discovery of molecules with specific structural and chemical properties is an open challenge in computational chemistry. Here, the authors propose a conditional generative neural network for the inverse design of 3d molecular structures. The rational design of molecules with desired properties is a long-standing challenge in chemistry. Generative neural networks have emerged as a powerful approach to sample novel molecules from a learned distribution. Here, we propose a conditional generative neural network for 3d molecular structures with specified chemical and structural properties. This approach is agnostic to chemical bonding and enables targeted sampling of novel molecules from conditional distributions, even in domains where reference calculations are sparse. We demonstrate the utility of our method for inverse design by generating molecules with specified motifs or composition, discovering particularly stable molecules, and jointly targeting multiple electronic properties beyond the training regime.
机构:
Harvard Med Sch, Lab Syst Pharmacol, Boston, MA 02115 USA
Harvard Med Sch, Dept Syst Biol, Boston, MA 02115 USAHarvard Med Sch, Lab Syst Pharmacol, Boston, MA 02115 USA
机构:
Univ Maryland, Dept Mech Engn, College Pk, MD 20740 USA
NIH, Ctr Clin, Bethesda, MD 20892 USAUniv Maryland, Dept Mech Engn, College Pk, MD 20740 USA
Elton, Daniel C.
Boukouvalas, Zois
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机构:
Univ Maryland, Dept Mech Engn, College Pk, MD 20740 USA
Amer Univ, Dept Math & Stat, Washington, DC 20016 USAUniv Maryland, Dept Mech Engn, College Pk, MD 20740 USA
Boukouvalas, Zois
Fuge, Mark D.
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h-index: 0
机构:
Univ Maryland, Dept Mech Engn, College Pk, MD 20740 USAUniv Maryland, Dept Mech Engn, College Pk, MD 20740 USA
Fuge, Mark D.
Chung, Peter W.
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h-index: 0
机构:
Univ Maryland, Dept Mech Engn, College Pk, MD 20740 USAUniv Maryland, Dept Mech Engn, College Pk, MD 20740 USA
机构:
Yale Univ, Dept Chem, POB 208107, New Haven, CT 06520 USA
Yale Univ, Energy Sci Inst, West Haven, CT 06516 USAYale Univ, Dept Chem, POB 208107, New Haven, CT 06520 USA
Freeze, Jessica G.
Kelly, H. Ray
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h-index: 0
机构:
Yale Univ, Dept Chem, POB 208107, New Haven, CT 06520 USA
Yale Univ, Energy Sci Inst, West Haven, CT 06516 USAYale Univ, Dept Chem, POB 208107, New Haven, CT 06520 USA
Kelly, H. Ray
Batista, Victor S.
论文数: 0引用数: 0
h-index: 0
机构:
Yale Univ, Dept Chem, POB 208107, New Haven, CT 06520 USA
Yale Univ, Energy Sci Inst, West Haven, CT 06516 USAYale Univ, Dept Chem, POB 208107, New Haven, CT 06520 USA
机构:
Harvard Med Sch, Lab Syst Pharmacol, Boston, MA 02115 USA
Harvard Med Sch, Dept Syst Biol, Boston, MA 02115 USAHarvard Med Sch, Lab Syst Pharmacol, Boston, MA 02115 USA
机构:
Univ Maryland, Dept Mech Engn, College Pk, MD 20740 USA
NIH, Ctr Clin, Bethesda, MD 20892 USAUniv Maryland, Dept Mech Engn, College Pk, MD 20740 USA
Elton, Daniel C.
Boukouvalas, Zois
论文数: 0引用数: 0
h-index: 0
机构:
Univ Maryland, Dept Mech Engn, College Pk, MD 20740 USA
Amer Univ, Dept Math & Stat, Washington, DC 20016 USAUniv Maryland, Dept Mech Engn, College Pk, MD 20740 USA
Boukouvalas, Zois
Fuge, Mark D.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Maryland, Dept Mech Engn, College Pk, MD 20740 USAUniv Maryland, Dept Mech Engn, College Pk, MD 20740 USA
Fuge, Mark D.
Chung, Peter W.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Maryland, Dept Mech Engn, College Pk, MD 20740 USAUniv Maryland, Dept Mech Engn, College Pk, MD 20740 USA
机构:
Yale Univ, Dept Chem, POB 208107, New Haven, CT 06520 USA
Yale Univ, Energy Sci Inst, West Haven, CT 06516 USAYale Univ, Dept Chem, POB 208107, New Haven, CT 06520 USA
Freeze, Jessica G.
Kelly, H. Ray
论文数: 0引用数: 0
h-index: 0
机构:
Yale Univ, Dept Chem, POB 208107, New Haven, CT 06520 USA
Yale Univ, Energy Sci Inst, West Haven, CT 06516 USAYale Univ, Dept Chem, POB 208107, New Haven, CT 06520 USA
Kelly, H. Ray
Batista, Victor S.
论文数: 0引用数: 0
h-index: 0
机构:
Yale Univ, Dept Chem, POB 208107, New Haven, CT 06520 USA
Yale Univ, Energy Sci Inst, West Haven, CT 06516 USAYale Univ, Dept Chem, POB 208107, New Haven, CT 06520 USA