Predicting protein druggability

被引:205
作者
Hajduk, PJ [1 ]
Huth, JR [1 ]
Tse, C [1 ]
机构
[1] Abbott Labs, Div Pharmaceut Discovery, Abbott Pk, IL 60064 USA
关键词
D O I
10.1016/S1359-6446(05)03624-X
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
The ability to predict whether a particular protein can bind with high affinity and specificity to small, drug-like compounds based solely on its 3D structure has been a longstanding goal of structural biologists and computational scientists. The promise is that an accurate prediction of protein druggability can capitalize on the huge investments already made in structural genomics initiatives by identifying highly druggable proteins and using this information in target identification and validation campaigns. Here we discuss the potential utility of tools that characterize protein targets and describe strategies for the optimal integration of protein druggability data with bioinformatic approaches to target selection.
引用
收藏
页码:1675 / 1682
页数:8
相关论文
共 42 条
[1]   Chromosome aberrations in solid tumors [J].
Albertson, DG ;
Collins, C ;
McCormick, F ;
Gray, JW .
NATURE GENETICS, 2003, 34 (04) :369-376
[2]  
An Jianghong, 2004, Genome Inform, V15, P31
[3]   Genomics: success or failure to deliver drug targets? [J].
Betz, UAK ;
Farquhar, R ;
Ziegelbauer, K .
CURRENT OPINION IN CHEMICAL BIOLOGY, 2005, 9 (04) :387-391
[4]   How many genomics targets can a portfolio afford? [J].
Betz, UAK .
DRUG DISCOVERY TODAY, 2005, 10 (15) :1057-1063
[5]  
Bliznyuk AA, 1999, J COMPUT CHEM, V20, P983, DOI 10.1002/(SICI)1096-987X(19990715)20:9<983::AID-JCC9>3.0.CO
[6]  
2-R
[7]  
Bohacek RS, 1996, MED RES REV, V16, P3, DOI 10.1002/(SICI)1098-1128(199601)16:1<3::AID-MED1>3.3.CO
[8]  
2-D
[9]   Fast prediction and visualization of protein binding pockets with PASS [J].
Brady, GP ;
Stouten, PFW .
JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 2000, 14 (04) :383-401
[10]   Computational mapping identifies the binding sites of organic solvents on proteins [J].
Dennis, S ;
Kortvelyesi, T ;
Vajda, S .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (07) :4290-4295