Sequencing of cDNA clones from the genetic map of tomato (Lycopersicon esculentum)

被引：22

作者：

Ganal, MW ^{[1
]}

Czihal, R ^{[1
]}

Hannappel, U ^{[1
]}

Kloos, DU ^{[1
]}

Polley, A ^{[1
]}

Ling, HQ ^{[1
]}

机构：

[1] Inst Plant Genet & Crop Plant Res, D-06466 Gatersleben, Germany

来源：

GENOME RESEARCH | 1998年 / 8卷 / 08期

关键词：

D O I：

10.1101/gr.8.8.842

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

The dense RFLP linkage map of tomato (Lycopersicon esculentum) contains >300 anonymous cDNA clones. Of those clones, 272 were partially or completely sequenced. The sequences were compared at the DNA and protein level to known genes in databases. For 57% of the clones, a significant match to previously described genes was found. The information will permit the conversion of those markers to STS markers and allow their use in PCR-based mapping experiments. Furthermore, it will facilitate the comparative mapping of genes across distantly related plant species by direct comparison of DNA sequences and map positions.

引用

页码：842 / 847

页数：6

共 22 条

[1] Mapping expressed sequence tag sites on yeast artificial chromosome clones of Arabidopsis thaliana DNA
Agyare, FD
Lashkari, DA
Lagos, A
Namath, AF
Lagos, G
Davis, RW
Lemieux, B
[J]. GENOME RESEARCH, 1997, 7 (01) : 1 - 9
[2] COMPARATIVE LINKAGE MAPS OF THE RICE AND MAIZE GENOMES
AHN, S
TANKSLEY, SD
[J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (17) : 7980 - 7984
[3] High-resolution mapping and isolation of a yeast artificial chromosome contig containing fw2.2: A major fruit weight quantitative trait locus in tomato
Alpert, KB
Tanksley, SD
[J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (26) : 15503 - 15507
[4] MAJORITY OF RANDOM CDNA CLONES CORRESPOND TO SINGLE LOCI IN THE TOMATO GENOME
BERNATZKY, R
TANKSLEY, SD
[J]. MOLECULAR & GENERAL GENETICS, 1986, 203 (01): : 8 - 14
[5] An improved method of partially digesting plant megabase DNA suitable for YAC cloning: Application to the construction of a 5.5 genome equivalent YAC library of tomato
Bonnema, G
Hontelez, J
Verkerk, R
Zhang, YQ
vanDaelen, R
vanKammen, A
Zabel, P
[J]. PLANT JOURNAL, 1996, 9 (01) : 125 - 133
[6] The Arabidopsis thaliana cDNA sequencing projects
Delseny, M
Cooke, R
Raynal, M
Grellet, F
[J]. FEBS LETTERS, 1997, 403 (03) : 221 - 224
[7] RFLP MAPS OF POTATO AND THEIR ALIGNMENT WITH THE HOMOEOLOGOUS TOMATO GENOME
GEBHARDT, C
RITTER, E
BARONE, A
DEBENER, T
WALKEMEIER, B
SCHACHTSCHABEL, U
KAUFMANN, H
THOMPSON, RD
BONIERBALE, MW
GANAL, MW
TANKSLEY, SD
SALAMINI, F
[J]. THEORETICAL AND APPLIED GENETICS, 1991, 83 (01) : 49 - 57
[8] Stable transfer of intact high molecular weight DNA into plant chromosomes
Hamilton, CM
Frary, A
Lewis, C
Tanksley, SD
[J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (18) : 9975 - 9979
[9] SEQUENCE-TAGGED SITES (STSS) AS STANDARD LANDMARKERS IN THE RICE GENOME
INOUE, T
ZHONG, HS
MIYAO, A
ASHIKAWA, I
MONNA, L
FUKUOKA, S
MIYADERA, N
NAGAMURA, Y
KURATA, N
SASAKI, T
MINOBE, Y
[J]. THEORETICAL AND APPLIED GENETICS, 1994, 89 (06) : 728 - 734
[10] A GENETIC-MAP OF POTATO (SOLANUM-TUBEROSUM) INTEGRATING MOLECULAR MARKERS, INCLUDING TRANSPOSONS, AND CLASSICAL MARKERS
JACOBS, JME
VANECK, HJ
ARENS, P
VERKERKBAKKER, B
HEKKERT, BTL
BASTIAANSSEN, HJM
ELKHARBOTLY, A
PEREIRA, A
JACOBSEN, E
STIEKEMA, WJ
[J]. THEORETICAL AND APPLIED GENETICS, 1995, 91 (02) : 289 - 300

← 1 2 3 →