Genotyping interleukin-10 high and low producers with single-tube bidirectional allele-specific amplification

被引:12
作者
Karhukorpi, J [1 ]
Karttunen, R [1 ]
机构
[1] Univ Oulu, Dept Med Microbiol, PL 5000, FIN-90014 Oulu, Finland
关键词
interleukin-10; PCR polymorphism; promoter region;
D O I
10.1159/000049184
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A simple bidirectional allele-specific PCR method is described for determining the -1082 A and G alleles in the interleukin-10 (IL-10) promoter region. This polymorphism is associated with IL-10 production capacity, and it is thus interesting to see whether different infectious and autoimmune conditions are associated with it, With our method, the A and G alleles may be studied simultaneously in a single PCR reaction, as amplification of the different alleles is performed by using 3'-mismatched and partly overlapping allele-specific upstream and downstream primers around the -1082 site. The fast and simple method described here is especially suitable for large-scale association studies. Copyright (C) 2001 S. Karger AG, Basel.
引用
收藏
页码:67 / 70
页数:4
相关论文
共 13 条
[1]   TUMOR-NECROSIS-FACTOR ALPHA-308 GENE VARIANTS IN RELATION TO MAJOR HISTOCOMPATIBILITY COMPLEX ALLELES AND FELTYS-SYNDROME [J].
BRINKMAN, BMN ;
GIPHART, MJ ;
VERHOEF, A ;
KAIJZEL, EL ;
NAIPAL, AMIH ;
DAHA, MR ;
BREEDVELD, FC ;
VERWEIJ, CL .
HUMAN IMMUNOLOGY, 1994, 41 (04) :259-266
[2]   Interleukin-10 promoter polymorphism predicts initial response of chronic hepatitis C to interferon alfa [J].
Edwards-Smith, CJ ;
Jonsson, JR ;
Purdie, DM ;
Bansal, A ;
Shorthouse, C ;
Powell, EE .
HEPATOLOGY, 1999, 30 (02) :526-530
[3]   Polymorphism of the interleukin-10 gene is associated with susceptibility to Epstein-Barr virus infection [J].
Helminen, M ;
Lahdenpohja, N ;
Hurme, M .
JOURNAL OF INFECTIOUS DISEASES, 1999, 180 (02) :496-499
[4]  
KARHUKORPI J, 2000, 4 INT WORKSH PATH HO
[5]  
Mok CC, 1998, ARTHRITIS RHEUM, V41, P1090, DOI 10.1002/1529-0131(199806)41:6<1090::AID-ART16>3.0.CO
[6]  
2-6
[7]   Induced heteroduplex genotyping of TNF-α, IL-1β, IL-6 and IL-10 polymorphisms associated with transcriptional regulation [J].
Morse, HR ;
Olomolaiye, OO ;
Wood, NAP ;
Keen, LJ ;
Bidwell, JL .
CYTOKINE, 1999, 11 (10) :789-795
[8]   HLA-DQB1 AND HLA-DQA1 TYPING BY PCR AMPLIFICATION WITH SEQUENCE-SPECIFIC PRIMERS (PCR-SSP) IN 2 HOURS [J].
OLERUP, O ;
ALDENER, A ;
FOGDELL, A .
TISSUE ANTIGENS, 1993, 41 (03) :119-134
[9]   ARMS-PCR methodologies to determine IL-10, TNF-α, TNF-β and TGF-β1 gene polymorphisms [J].
Perrey, C ;
Turner, SJ ;
Pravica, V ;
Howell, WM ;
Hutchinson, IV .
TRANSPLANT IMMUNOLOGY, 1999, 7 (02) :127-128
[10]   Cytokine gene polymorphisms predict acute graft rejection following renal transplantation [J].
Sankaran, D ;
Asderakis, A ;
Ashraf, S ;
Roberts, ISD ;
Short, CD ;
Dyer, PA ;
Sinnott, PJ ;
Hutchinson, IV .
KIDNEY INTERNATIONAL, 1999, 56 (01) :281-288